Query= MSMg01no348_p24.b1 MSMg01no348_p24.b1 CHROMAT_FILE:
MSMg01no348_p24.b1 PHD_FILE: MSMg01no348_p24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:29 2005
(533 letters)
>mm_chr14_24351619_24352551
Length = 933
Score = 963 bits (498), Expect = 0.0
Identities = 525/534 (98%), Gaps = 2/534 (0%)
Strand = Plus / Minus
Query: 1 agagagcagcacatgcctctcctctctctgccataggctacctgctctccctactacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 agagagcagcacatgcctctcctctctctgccataggctacctgctctccctactacttg 674
Query: 61 cttctcttcaatatcagatcacgtcttagggggctcgaaagggagagacaggggaatggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 cttctcttcaatatcagatcacgtcttagggggctcgaaagggagagacaggggaatggg 614
Query: 121 ctgttctgctttgattttccattgagaaatttgcctggagcaaggtttagtggtaacata 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ctgctctgctttgattttccattgagaaatttgcctggagcaaggtttagtggtaacata 554
Query: 181 gctgatgagacagggtaagcctcaaacttctgttttttcagttggcaattccattctctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gctgatgagacagggtaagcctcaaacttctgttttttcagttggcaattccattctctg 494
Query: 241 tcagagaacttagcttgatatgaggtgaagcacagagtgactcattgagatgtctggaaa 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 tcagagaacttcgcttgatatgaggtgaagcacagagtgactcattgagatgtctggaaa 434
Query: 301 aggcttgaaggtcaggagttagcacaagcagccttgtgcttgggagcgctagcttcatac 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 433 aggcttgaaggtcaggagttagcacaagcagccttgtgcttgggagtgctagcttcatac 374
Query: 361 cacagcatccagagccctggagctaactgcatcaggtcacaaagtgggcggatatggcca 420
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct: 373 cacagcatccagagccctggagctaaccgtatcaggtcacaaagtgggcggatatggcca 314
Query: 421 attcgtatgttctctgagaacattctagatgtgagccattccgattgtgtctaggcaagt 480
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 313 attcgtatgttctctgagaacattctagatgtgagccatttcaattgtgtctaggcaagt 254
Query: 481 ggcagagtgactgggtcccagagggagtgacagactttctg-catatctgcact 533
|||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 253 ggcagagtgactgggtcccagagggagtgacagacttt-tggcatatctgcact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_p24.g1 MSMg01no348_p24.g1 CHROMAT_FILE:
MSMg01no348_p24.g1 PHD_FILE: MSMg01no348_p24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:29 2005
(497 letters)
>mm_chr14_24186010_24186906
Length = 897
Score = 946 bits (489), Expect = 0.0
Identities = 495/497 (99%)
Strand = Plus / Plus
Query: 1 catacagtagagataaatctgctctttatttatttggccaatatcagatgaaagatggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catacagtagagataaatctgctctttatttatttggccaatatcagatgaaagatggga 260
Query: 61 cagatctgtgtttctctaagcattaaccatgtcaaattaaaatgccaacaataattttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagatctgtgtttctctaagcattaaccatgtcaaattaaaatgccaacaataattttat 320
Query: 121 gagtgaattcttggtgcatatatcaaaatagggcaacgttctaaattttgcccaggaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagtgaattcttggtgcatatatcaaaatagggcaacgttctaaattttgcccaggaaag 380
Query: 181 agagtttagacaatggtaagctagtgcgtgtgaaggtagctcaacttcacccgacaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagtttagacaatggtaagctagtgcgtgtgaaggtagctcaacttcacccgacaagag 440
Query: 241 gctgctcttggctgcaaattcttttaataaggcctcccagggttttactttcttagcaga 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctgcacttggctgcaaattcttttaataaggcctcccagggttttactttcttagcaga 500
Query: 301 gcacaggggaaggacagctatgtcctcaggcctgtagcaacaaaaaggagcagagacatg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 gcacaggggaaggacagctatgtcctcaggcctgtagcaacaaaaaggagcagagacacg 560
Query: 361 atcaaagcctcaacaattacagccacctgggacttcttcttttgaatgtaaagatgaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atcaaagcctcaacaattacagccacctgggacttcttcttttgaatgtaaagatgaaga 620
Query: 421 actggacattaaatagtgcgacttgacttacaggcaatatggacactttcgggaagttgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actggacattaaatagtgcgacttgacttacaggcaatatggacactttcgggaagttgt 680
Query: 481 gcagtgtttcccactcc 497
|||||||||||||||||
Sbjct: 681 gcagtgtttcccactcc 697
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 897
Length adjustment: 10
Effective length of query: 487
Effective length of database: 887
Effective search space: 431969
Effective search space used: 431969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
