Query= MSMg01no349_e03.b1 MSMg01no349_e03.b1 CHROMAT_FILE:
MSMg01no349_e03.b1 PHD_FILE: MSMg01no349_e03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:49 2005
(633 letters)
>mm_chr14_112978962_112979995
Length = 1034
Score = 957 bits (495), Expect = 0.0
Identities = 592/635 (93%), Gaps = 21/635 (3%)
Strand = Plus / Minus
Query: 1 accttcaggatatgactatgatttctgatggaaccatattggaatatatatatatatata 60
|||||| |||||| || |||||||||| |||||||| ||||||||||||||| |||
Sbjct: 923 accttctggatataacgatgatttctggtggaaccagattggaatatatata-----ata 869
Query: 61 tatatgcatatgcatatatattatataatattaaatatatattaa-aatttacatttgac 119
||||| || |||||||||||||||||||||||| | ||||||||||||
Sbjct: 868 tatat-------------ta-tatataatattaaatatatattaagattttacatttgac 823
Query: 120 ttaagatgccatgaaaaaatttgcataatgcaagatggttccagctacctccttggtttg 179
|||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 822 ttaagatgccatgagaaaatttacataatgcaaggtggttccagctacctccttggtttg 763
Query: 180 ggtactattggatatgtactggactgctgctttacttcagtgaacgcaacaaatgtgaag 239
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 ggtactatggggtatgtactggactgctgctttacttcagtgaacgcaacaaatgtgaag 703
Query: 240 agaaaaaagagacagaacttcttgctggagatcatctagagctagtgcagaagctttaca 299
||||||||||||||| ||||| |||| |||||| ||||||||||||||||||||||||||
Sbjct: 702 agaaaaaagagacaggacttcctgctagagatcgtctagagctagtgcagaagctttaca 643
Query: 300 aaggtcctggagaagcggggagtccagttgccaatcgcattgattcaggaggatcaagaa 359
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 642 aaggtcctggagaagtggggagaccagttgccaatcgcattgattcaggaggatcaagaa 583
Query: 360 acgatgaaagagatgtttaaagtcgatcagttaaacacatggcaagtgaggtgattgcat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 acgatgaaagagatgtttaaagtcgatcagttaaacacatggcaagtgaggtgattgcat 523
Query: 420 tccacagatccttaccaggtgggaggttagaggggtgtaaaataaaggtgtatccagata 479
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 522 tccacagatccttaccaggtgggaggttagaggggtgtaaaacaaaggtgtatccagata 463
Query: 480 acttcctacaacaagcgtggtgatggcgttccacagtgaggcacagagcacact-ctgcg 538
||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||
Sbjct: 462 ccttcctacaacaagcgtggtgattgtgttccacagtgaggcacagagcacacttctgcg 403
Query: 539 aacagtccacagtgtcattaatcactcgccaagacacatgatagaagagattgttcttga 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 aacagtccacagtgtcattaatcactcgccaagacacatgatagaagagattgttcttga 343
Query: 599 gatgatgacagtgaaagaggcttttggaaagacct 633
|||||||||||||||||||||||||| ||||||||
Sbjct: 342 gatgatgacagtgaaagaggcttttgaaaagacct 308
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1034
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1024
Effective search space: 637952
Effective search space used: 637952
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_e03.g1 MSMg01no349_e03.g1 CHROMAT_FILE:
MSMg01no349_e03.g1 PHD_FILE: MSMg01no349_e03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:49 2005
(626 letters)
>mm_chr14_112847238_112848263
Length = 1026
Score = 1210 bits (626), Expect = 0.0
Identities = 626/626 (100%)
Strand = Plus / Plus
Query: 1 aacagaggaaaacaatacacaggaaacttcaggtttattcctgcctatgtgaatgtataa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacagaggaaaacaatacacaggaaacttcaggtttattcctgcctatgtgaatgtataa 260
Query: 61 caatacctcatagcaaaaacttattgttgacactgttacaccgaagaatgctttacaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caatacctcatagcaaaaacttattgttgacactgttacaccgaagaatgctttacaata 320
Query: 121 tagtaattctgaaattttttttcactaataaatatccagtttatatcataatatgtttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagtaattctgaaattttttttcactaataaatatccagtttatatcataatatgtttta 380
Query: 181 ctttctcatcattatggttccacatgatttaaaaatacttttgagaatatttaccactcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttctcatcattatggttccacatgatttaaaaatacttttgagaatatttaccactcc 440
Query: 241 taaatattttcctttattcttacaattctataaatgccatactttcctcgttgtttgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaatattttcctttattcttacaattctataaatgccatactttcctcgttgtttgttt 500
Query: 301 atttgtctctgagttgctttcgatttttctttgtgcatttctttttgtgccaattatcat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttgtctctgagttgctttcgatttttctttgtgcatttctttttgtgccaattatcat 560
Query: 361 aaatttagaagtacaattctaatgagggtgactatggctaactttattggacattgcatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaatttagaagtacaattctaatgagggtgactatggctaactttattggacattgcatt 620
Query: 421 ttcttatgtgtttgagaagaatgttgttccatgctagggtgaaactcgtgtgtgtgtgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcttatgtgtttgagaagaatgttgttccatgctagggtgaaactcgtgtgtgtgtgta 680
Query: 481 aacatggatttattccttaatataagagtagtgacacaaaacatttttgagggctggaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aacatggatttattccttaatataagagtagtgacacaaaacatttttgagggctggaga 740
Query: 541 gatggctgagcagttaagagcacttactgctcttccagtggtcctgaactcaatttcagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gatggctgagcagttaagagcacttactgctcttccagtggtcctgaactcaatttcagc 800
Query: 601 aacaacatggtggctcacaatcatgt 626
||||||||||||||||||||||||||
Sbjct: 801 aacaacatggtggctcacaatcatgt 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
