NNNNNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTTCTCGAGGTCTGGGGCTTCCCTCGTTGGAA
ATATGGTAGAAAAGCAAGAAAGCTCAGTGCAGAAGGTCAGGGAGGTTCAG
ATGTCTGTGACTACTCACAGCAATTTATTCCAGAATGTTTGAAGTTACCA
GAATTAGTTCCATATTCATGTTTTAATGTATTTGCTCATAACTGGAAAAT
ATTTTGATGGTGTTTCTCAGAAACAGGATTAGCTATCAAATTCTTTTATT
ATCTATAGAATATGATCAACTAATCAAGTCACAGTTCTCTACTGACATCT
AGTTACAAATATGCTCGCATGGGGGAGTGGATCCTCAAAGGAGTTTTGTA
TTTGTGACTAGACTGTAGAGATCAAATACTTTCTTAAATACTGAGAAAAT
TATCTTTATCTAGTTCAATACATATTATTTTCTTTGAATCATATTTTGAC
CTAGAAGAGAAAACACTATTAAGTGTTATAGTGCTGATCACACAGACACA
CAGACACCACACACACACACACACACACACACACACACACATGGAAATTT
CTGGTTTCTTTGGAAACTCAGTTGTGTTAGGTGATATTTTTCTGGGAATG
GACTTGTGAGAGGATGTTTTTGGTGAAACAGACACCTGGGAAGATGTTTT
GCACAGAACAGGCTATACTCTATTTCTTGGAGGTCTCTTGGAAAAGGG

NNNNNTTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGTTTAGCTCTAAAC
CCCATTTTTTAATGGGGTTATTTGATTTTCTGGAGCAAAAGACACCATCA
ATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTTCTTATCCT
TAATCCGATAGGGGACTAACATCCAATATATATAAAGAACTCATGTTGTA
ATTTTGATGGAAACTGGGTTGAGTCTGTAGATTGCTTTTTGTAGGATCAT
TATTACATTCATTATTTTATTTAGTTTTACTAATCATGATCATGGGAGAA
AGTCGACCTGTCTATAAAACAAGTTACAGCTAATGCTGATGAGGATGTGG
AACAAGGGGAACATTCATGCAGTGTTGGTGGGAGTCCAAAATTTGTAGCC
AGTATGAATATCAATGTGCCTTTTCCTCAGAAAGATAAAAATGAATCTAC
CTGAAGATCCAGCTCTTTCTGATGCATCCCAAGTTCCAGATCTCCTCTTG
TGGGCATATACAAAAATTATATTTCTTTATACCACAAGGATACTTGTTTA
ATTATGTTCATTGCTGCTCTATTTGTAATATACCGGAGGATCACAAAACA
TAGATGACCCTCTTACGAAGAATAGATAAAGACAATGGGGAAAATTTAAC
GAGGGATTATCTCCACAATGTTACAAAATGGCTCCCTTACAAATACA

Query= MSMg01no350_a06.b1 MSMg01no350_a06.b1 CHROMAT_FILE:
MSMg01no350_a06.b1 PHD_FILE: MSMg01no350_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:48 2005
         (555 letters)



>mm_chr14_110729459_110730413
          Length = 955

 Score =  967 bits (500), Expect = 0.0
 Identities = 541/564 (95%), Gaps = 15/564 (2%)
 Strand = Plus / Minus

                                                                       
Query: 7   aggtctggggcttccctcgttggaaatatggtagaaaagcaagaaagctcagtgcagaag 66
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aggtctggggcttccctccttggaaatatggtagaaaagcaagaaagctcagtgcagaag 610

                                                                       
Query: 67  gtcagggaggttcagatgtctgtgactactcacagcaatttattccagaatgtttgaagt 126
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 609 gtcagggaggttcagatgtctgtgactactcacagtaatttattccagaatgtttgaagt 550

                                                                       
Query: 127 taccagaattagttccatattcatgttttaatgtatttgctcataactggaaaatatttt 186
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 549 taccagaattagttccatatccatgttttaatgtatttgctcataactggaaaatatttt 490

                                                                       
Query: 187 gatggtgtttctcagaaacaggattagctatcaaattcttttattatctatagaatatga 246
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 489 gatggtgtttctcagaaacaggattagctatcaaattcttttattacctatagaatatga 430

                                                                       
Query: 247 tcaactaatcaagtcacagttctctactgacatctagttacaaatatgctcgcatggggg 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tcaactaatcaagtcacagttctctactgacatctagttacaaatatgctcgcatggggg 370

                                                                       
Query: 307 agtggatcctcaaaggagttttgtatttgtgactagactgtagagatcaaatactttctt 366
           ||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||
Sbjct: 369 agtggatcctcaaaggagttttgtatttgtgactagactgtagagataaaagattttctt 310

                                                                       
Query: 367 aaatactgagaaaattatctttatctagttcaatacatattattttctttgaatcatatt 426
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 309 aaatactgagaaaattatctttatctagttcaatacatattattttcttggaatcatatt 250

                                                                       
Query: 427 ttgacctagaagagaaaacactattaagtgttatagtgctgatcacacagacacacagac 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ttgacctagaagagaaaacactattaagtgttatagtgctgatcacacagacacacagac 190

                                                                       
Query: 487 ac---------------cacacacacacacacacacacacacacacacacatggaaattt 531
           ||               |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 acacagacacacacacacacacacacacacacacacacacacacacacacatggaaattt 130

                                   
Query: 532 ctggtttctttggaaactcagttg 555
           ||||||||||||||||||||||||
Sbjct: 129 ctggtttctttggaaactcagttg 106


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space:   515025
Effective search space used:   515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)