Query= MSMg01no350_f10.b1 MSMg01no350_f10.b1 CHROMAT_FILE:
MSMg01no350_f10.b1 PHD_FILE: MSMg01no350_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:14 2005
(250 letters)
>mm_chr14_87743860_87744509
Length = 650
Score = 453 bits (234), Expect = e-132
Identities = 246/250 (98%)
Strand = Plus / Minus
Query: 1 cttccttctggggttagtctcacattgtcactttctaatttatataattatattcccctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 cttccttctggggttagtctcacattgtcactttctaatttatataattatattcccctt 391
Query: 61 gtttttccccagtacaccagattcttcttttctttttctgccaagactcaaggtttaaaa 120
|||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 390 gtttatccccagtaaaccagattcctcttttctttttctgccaagactcaaggtttaaaa 331
Query: 121 ttatcttttttcctgttctttaaacttacttttatttattaatacatacctttgtttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ttatcttttttcctgttctttaaacttacttttatttattaatacatacctttgtttttt 271
Query: 181 ccattggttttgttttgcttttagaaattgcttaatgttgcattatagcccttttgtggg 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 270 ccattggttttgttttgcttttagaaattgcttaatgctgcattatagcccttttgtggg 211
Query: 241 tacgtgtcac 250
||||||||||
Sbjct: 210 tacgtgtcac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no350_f10.g1 MSMg01no350_f10.g1 CHROMAT_FILE:
MSMg01no350_f10.g1 PHD_FILE: MSMg01no350_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:14 2005
(261 letters)
>mm_chr14_87584651_87585312
Length = 662
Score = 499 bits (258), Expect = e-146
Identities = 261/262 (99%), Gaps = 1/262 (0%)
Strand = Plus / Plus
Query: 1 attaaatattttgaatccatttcatgaaatac-catatatagtgatatggaaagatgtct 59
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 attaaatattttgaatccatttcatgaaatacacatatatagtgatatggaaagatgtct 260
Query: 60 atggctacaggaaagaaacatgatctatgctgttatcttagttgaatggttttattgagt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggctacaggaaagaaacatgatctatgctgttatcttagttgaatggttttattgagt 320
Query: 120 ttacatgtatttatgtatagaaacatgtcttaacatgttcatattactatttatgtatga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttacatgtatttatgtatagaaacatgtcttaacatgttcatattactatttatgtatga 380
Query: 180 ttctttctcagtaactaaatgataagacatttggaggaatacttttttccttttatggtg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctttctcagtaactaaatgataagacatttggaggaatacttttttccttttatggtg 440
Query: 240 tggtggtttgaatatgtttggt 261
||||||||||||||||||||||
Sbjct: 441 tggtggtttgaatatgtttggt 462
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 261
Length of database: 662
Length adjustment: 9
Effective length of query: 252
Effective length of database: 653
Effective search space: 164556
Effective search space used: 164556
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
