Query= MSMg01no350_g09.b1 MSMg01no350_g09.b1 CHROMAT_FILE:
MSMg01no350_g09.b1 PHD_FILE: MSMg01no350_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:18 2005
(434 letters)
>mm_chr14_80956835_80957668
Length = 834
Score = 571 bits (295), Expect = e-167
Identities = 367/423 (86%), Gaps = 51/423 (12%)
Strand = Plus / Minus
Query: 5 gaattcaggtgtgcctccggatagagcgcgcccataacttcacctcctaaatgttctgca 64
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gaattcaggtgggggtccggatagagcgcgcccataacttcacctcctaaatgttctgca 731
Query: 65 cctcccttccccaagtacttatcccagctcacaggggtgcttaagaaactcaatctaatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ----ccttccccaagtacttatcccagctcacaggggtgcttaagaaactcaatctaa-- 677
Query: 125 cttctaaaacaactttatttatttatttatttatttatttatttatttatttatttattt 184
|||||||||||| |||
Sbjct: 676 -ttctaaaacaac--------------------------------------------ttt 662
Query: 185 atttatttatttatttatttatttatttatttatggctccaaaaatccctgcattcttag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atttatttatttatttatttatttatttatttatggctccaaaaatccctgcattcttag 602
Query: 245 cctcaacgatggcattgctacctgctaccgtcacggtgtcatgaaggacccaggactgta 304
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 601 cctcaacgatggcattgctacctgctaccgccacggtgtcatgaaggacccaggactgta 542
Query: 305 aaagaatgatgcaccatgatgcaccttgtcaggaacaagcccagagttgccagcatggga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaagaatgatgcaccatgatgcaccttgtcaggaacaagcccagagttgccagcatggga 482
Query: 365 gaattgcacggtcaccttgacctcgttagtgttccatccaaacgtttctatacttttctc 424
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 481 gaattgcacggtcaccttgacctcgttagtgttccatccgaacgtttctatacttttctc 422
Query: 425 aca 427
|||
Sbjct: 421 aca 419
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no350_g09.g1 MSMg01no350_g09.g1 CHROMAT_FILE:
MSMg01no350_g09.g1 PHD_FILE: MSMg01no350_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:18 2005
(466 letters)
>mm_chr14_80801011_80801875
Length = 865
Score = 878 bits (454), Expect = 0.0
Identities = 463/466 (99%), Gaps = 1/466 (0%)
Strand = Plus / Plus
Query: 1 tctctttggtttgcaaacaatgtcccctagatcacatggttctctgcttcacagacatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctctttggtttgcaaacaatgtcccctagatcacatggttctctgcttcacagacatct 260
Query: 61 tgggtacaaagatggatctcagaaagatgaggcaaaacaaaacaaaaaaaaatccctgcc 120
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 261 tgggtacaaagatggatctcagaaagatgaggcaaaacaaaac-aaaaaaaatccctgtc 319
Query: 121 tttgaaatgcatattttattcagcctttaagataagggcttcaccctatttcaaccccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttgaaatgcatattttattcagcctttaagataagggcttcaccctatttcaaccccca 379
Query: 181 aggcttcaggagaaaatggaggaatggctgcctgtcagaaaataacaaacatggaaaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aggcttcaggagaaaatggaggaatggctgcctgtcagaaaataacaaacatggaaaagt 439
Query: 241 tttgacaagttcactataattatcatagctgttaacttggttaaaagtaaaatttctgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tttgacaagttcactataattatcatagctgttaacttggttaaaagtaaaatttctgtt 499
Query: 301 aagcagtaattatgaagtagctgttctaggaatgacatcctttatttttttgttctttct 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 500 aagcagtaattatgaagtagctgttctagaaatgacatcctttatttttttgttctttct 559
Query: 361 ttgtctcagctctgtcctgagaagttctgtattagatatcaattctaccatccctgactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttgtctcagctctgtcctgagaagttctgtattagatatcaattctaccatccctgactt 619
Query: 421 gggaactaattttgtcctatttgctagtgtctataaggacacggca 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gggaactaattttgtcctatttgctagtgtctataaggacacggca 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 865
Length adjustment: 10
Effective length of query: 456
Effective length of database: 855
Effective search space: 389880
Effective search space used: 389880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
