CTTCGCTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTATAAATATTCTTTGGTTTCTTCTCTTAACCTTTCAC
ACTTTAGTGTTCTCCCAAAGATTTTGTTTCTTTACTTTCTATTGGAAACA
GCACTAATTTTAGGTTTTATTTTTGTTTCAGATTTCACTCAAAGTCATGG
TTTCCATCATGATACATAGTTCTATCTTGATACATAGTTGTAAGTCAATT
TTGATCTCATTCATAGAGATTTAGGTAGTGCGACATTACATTAAAGAATG
TGTGTAACACCCACAGCGTACTACAATCCATACACACTATTACCAAATAA
TAATACCATTAATTTTGAACTTCAATATCAAAATAAAATTGTTATATAAT
GTTTTATCATATTGAAAATGAACATTATCTACTGTTTCAGGGAAGAATTC
AGACAATATCATATAGCAGAAAAATGACTATCTAAAATAACCTAAAAAAA
CCCTCATAAAATTCAAAATTATAAGGGACACTGACCTACAAGGAATTGAT
ATTCCCTTTAGATCACCTCCAATTAAGGCAAGACTCTGTCTGAACTTCCT
TTTTTAGTACATTTTTTAGAAATCTTTCAAGTATGAATTTCTGCCTCCTC
TCCTATCTTGAGAATGAATTCTCTCCCCTCTTTATAAACAATTTCTTATA
CCCCTAATTATTCTTTCTCTCAAGTACATTTCATACCCTATTTTACCTGG
GAATTCGCTTTCCTCATAAAAATAAATTCGCTCCC

NCCTTTTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXCATAGGAAACCCTTTTAGCTGATTATCATTTTCAGCAAAGTGTC
AAGAAATAAAGTAAACATATAAAAATATAGACTTCCTATATACAAATGAC
AAATGGGTTAGACAGAATTTAAGAAGCTACATGTTTCCTAATAGCTATAA
AAAGATGGACATATCTTGTGATAACTCTTAACCCAGCATATGAAAGGATG
GAATGATAAAAACAAAAAAAACAAAAAAAAAAAACCAAAACACCTTTGAA
TCAAAGAAGAAAGAAATTAATGAAGATACCAGAAGATGGGAAGATGTCAT
ATACTCATGTGTCAGCAGAAGAAACATAGTAAAAAGACCAGACCTTTTTG
CCAAAAGAAATAAAGATTTAATGCTATCCCAATCAAAATTCCAGTACAAT
TGTTTACAGATCTTGAAAGCACAATCTTAAACTTTCTATGGAAAACAAAA
AGCACAAGATATATAAAACAGTTCTGAATAGTAAAAGAACTGCAGGAAGT
ATCACCATTCTACAACTCCAATTATAAAAGAAATCTACAACATATAAAGC
GGATTTCCCCAAAAAAAAATTTTTTCACCGGAATTTGTTAAAGAATCTTA
AGAAGCCCCCN

Query= MSMg01no350_h04.b1 MSMg01no350_h04.b1 CHROMAT_FILE:
MSMg01no350_h04.b1 PHD_FILE: MSMg01no350_h04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:22 2005
         (485 letters)



>mm_chr14_110924222_110925106
          Length = 885

 Score =  814 bits (421), Expect = 0.0
 Identities = 465/487 (95%), Gaps = 17/487 (3%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctataaata--ttctttggtttcttctcttaacctttcacactttagtgttctc 61
           ||||||||||||| |  ||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctataaacacatt--ttggtttcttctcttaacctttcacactttagtgttctc 261

                                                                       
Query: 62  ccaaagattttgtttctttactttctattggaaacagcactaattttaggttttattttt 121
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ccaaggattttgtttctttactttctattggaaacagcactaattttaggttttattttt 321

                                                                       
Query: 122 gtttcagatttcactcaaagtcatggtttccatcatgatacatagttctatcttgataca 181
           |||||||||||||||||||||||||||||||||||||       |  | |||||||||||
Sbjct: 322 gtttcagatttcactcaaagtcatggtttccatcatg-------g--c-atcttgataca 371

                                                                       
Query: 182 tagttgtaagtcaattttgatctcattcatagagatttaggtagtgcgacattacattaa 241
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 372 tagttgtaagtcaattttgatctcattcatagagatttaggtagtgtgacattacattaa 431

                                                                       
Query: 242 agaatgtgtgtaacacccacagcgtactacaatccatacacactattaccaaataataat 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 agaatgtgtgtaacacccacagcgtactacaatccatacacactattaccaaataataat 491

                                                                       
Query: 302 accattaattttgaacttcaatatcaaaataaaattgttatataatgttttatcatattg 361
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 accattaatttttaacttcaatatcaaaataaaattgttatataatgttttatcatattg 551

                                                                       
Query: 362 aaaatgaacattatctactgtttcagggaagaattcagacaatatcatatagcagaaaaa 421
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 552 aaaatgaacattatctactgtttcagggaagaattcagacaatatcatatagtagaaaaa 611

                                                                       
Query: 422 tgactatctaaaataacctaaaaaaa---ccctcataaaattcaaaattataagggacac 478
           ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||
Sbjct: 612 tgactatctaaaataacctaaaaaaaaaaccctcataaaattcaaaattataagggacac 671

                  
Query: 479 tgaccta 485
           |||||||
Sbjct: 672 tgaccta 678


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space:   415625
Effective search space used:   415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)