Query= MSMg01no350_h08.b1 MSMg01no350_h08.b1 CHROMAT_FILE:
MSMg01no350_h08.b1 PHD_FILE: MSMg01no350_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:23 2005
(422 letters)
>mm_chr14_57211461_57212282
Length = 822
Score = 717 bits (371), Expect = 0.0
Identities = 407/419 (97%), Gaps = 2/419 (0%)
Strand = Plus / Minus
Query: 5 gaattccctctg-tttcactcacctgcagacacaaaggcaaatacacgtcagtttgggac 63
|||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 622 gaattccctctgcttt-actcacctgtagacacaaaggcaaatacacgtcagtttgggac 564
Query: 64 ttgatggagtttctgaggcttactccctaagggggtgcttcagggaagtggaggaaccat 123
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttgacggagtttctgaggcttactccctaagggggtgcttcagggaagtggaggaaccat 504
Query: 124 tagaaggctatttcttaaatagctcactaagtttaccaagagtcgcttccatctgtctaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tagaaggctatttcttaaatagctcactaagtttaccaagagtcgcttccatctgtctaa 444
Query: 184 atgtagggttattggctggatcacagacaatttgtcagtggccacagcaccgaagaaaaa 243
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 443 atgtagggttattgactggatcacagacaatttgtcagtggccacagcactgaagaaaaa 384
Query: 244 cgcagcatcacatttttatacatgtgtgcacatgatcacatagatacccaagaggagggg 303
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 383 cgcagcatcacatttttatacatgtgtgcacatgaacacatagatacccaagaggatggg 324
Query: 304 aatgcaaatggaactataggagaagtgctcttcacagggaatcatggagtgatgtcagca 363
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aatgcaaatggaactatagtagaagtgctcttcacagggaatcatggagtgatgtcagca 264
Query: 364 tcaagccagggccatgttcctaattatgcaagtgcattacagacctaatggcaggaagt 422
||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 263 tcaagccagggccttgttcctaattatgaaagtgcattacggacctaatggcaggaagt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no350_h08.g1 MSMg01no350_h08.g1 CHROMAT_FILE:
MSMg01no350_h08.g1 PHD_FILE: MSMg01no350_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:23 2005
(382 letters)
>mm_chr14_57032915_57033696
Length = 782
Score = 650 bits (336), Expect = 0.0
Identities = 370/384 (96%), Gaps = 6/384 (1%)
Strand = Plus / Plus
Query: 1 aaaaaggagatggtttgaagagaaacccttcttcaaagatgctggaaatgaaatgttcaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 aaaaaggagatggtttgaagagaaacccttcttcaaagatgctggaaatgaaatgtt--- 260
Query: 61 caacaacaacaacaacaaaaaacccactcagttaaaatcttcactaatagagtggaccgc 120
|||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 261 caacaacaacaacaacaaaacatccactcagttaaaatcttcactaatagagtggaccga 320
Query: 121 aaggagggcagaacatgagggcttgaaggacagtatagaagaattgttacattctgttga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaggagggcagaacatgagggcttgaaggacagtatagaagaattgttacattctgttga 380
Query: 181 ggactgtaatcttttattttttattttttggttttttgagacagggtttctctgtgaagc 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggactgtaattttttattttttattttttggttttttgagacagggtttctctgtgaagc 440
Query: 241 cctggctgtcctggaactcactctgtagagcaggctggcctcaaactcagaaatctgcct 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 cctggctgtcctggaactcactctgtagagcagactggcctcaaactcagaaatctgcct 500
Query: 301 gcctctgcctcccaagtgctaagattaaaggcatgtgccaccactgcctggctgtaattt 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcctctgcctcccaagtgctaggattaaaggcatgtgccaccactgcctggctgtaattt 560
Query: 361 ttttt---aattttttaaaaaatt 381
||||| | |||||| |||||||
Sbjct: 561 ttttttttattttttttaaaaatt 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
