Query= MSMg01no350_p24.b1 MSMg01no350_p24.b1 CHROMAT_FILE:
MSMg01no350_p24.b1 PHD_FILE: MSMg01no350_p24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:08 2005
(335 letters)
>mm_chr14_118025163_118025897
Length = 735
Score = 607 bits (314), Expect = e-178
Identities = 329/334 (98%), Gaps = 1/334 (0%)
Strand = Plus / Minus
Query: 1 ggggaaaagaaaaactgtaagagctatctgatggagcactgagactgagaagaggagaga 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gggg-aaagaaaaactgtaagagctatctgatggagcactgagactgagaagaggagaga 475
Query: 61 ggaggggagcatttgaaatgacgttagccagaacttgcccctaattctgctcatcattga 120
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 474 ggaggggagcatttgaaatgacattagccagaacttgtccctaattctgctcatcattga 415
Query: 121 atataaccaacacacaggggagcttatattttagtttttaaaaatcaactgattttgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 atataaccaacacacaggggagcttatattttagtttttaaaaatcaactgattttgttt 355
Query: 181 gagacattacatttcacatcaaactgtcagctaacaaccaggtatattgatagcataaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gagacattacatttcacatcaaactgtcagctaacaaccaggtatattgatagcataaag 295
Query: 241 atttatgttaggatagccaatgagcaccaaggggaaacaattaaggagtaactattaagg 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 atttatgttagggtagccaatgagcaccaaggggaaacaattaaggagtaactattaagg 235
Query: 301 gtctgtgagatggctcagtgggtataggcacttg 334
| ||||||||||||||||||||||||||||||||
Sbjct: 234 gcctgtgagatggctcagtgggtataggcacttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no350_p24.g1 MSMg01no350_p24.g1 CHROMAT_FILE:
MSMg01no350_p24.g1 PHD_FILE: MSMg01no350_p24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:08 2005
(341 letters)
>mm_chr14_117865767_117866507
Length = 741
Score = 619 bits (320), Expect = 0.0
Identities = 335/340 (98%)
Strand = Plus / Plus
Query: 1 tctgaaaccttataatttggaaatgctgtgtgaggtcatataacataacttgccaacata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgaaaccttataatttggaaatgctgtgtgaggtcatataacataacttgccaacata 260
Query: 61 acttatttaattgaagtttttaaaagctgtctcctattgaggctgctagcctgggtgact 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 acttatttaattgaagtttttaaaagctgtctcctattgaggctgctagactgggtgact 320
Query: 121 tcaaaggaaagtgagtacagataagagtggagaaccagactagattttaagaaatcagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaaaggaaagtgagtacagataagagtggagaaccagactagattttaagaaatcagag 380
Query: 181 ggtgggggaaggatggattagtcgaaaggattggaaacaaccaataaagaagatgaaaac 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtgggggaaggagggattagtcgaaaggattggaaacaaccaataaagaagatgaaaac 440
Query: 241 cacagaatattttttaggacccaaatgaaaaggcaatatcaagctggcgaaagaaagcca 300
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacagaatatgttaaaggacccaaatgaaaaggcaatatcaagctggcgaaagaaagcca 500
Query: 301 tgacagttccacaaatgggtccgtaaaagatggactgggt 340
||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgacagttccacaaatgggtccgtaaaagatggactgggt 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
