MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-351J10
Chromosome	14 (Build37)
Map Location	49,382,673 - 49,382,839
singlet/doublet	singlet
Overlap gene	none
Upstream gene	4930447J18Rik, Map1lc3-ps2, Peli2, EG624367, LOC100041831, 6720456H20Rik, 4930572G02Rik, Otx2, LOC100041864
Downstream gene	LOC666972, Exoc5, 4932432K03Rik, LOC218997, Nat12, 1700011H14Rik, Slc35f4, 3632451O06Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	4930447J18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73961 MGI:1921211
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Map1lc3-ps2 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606520
definition	note : microtubule-associated protein 1 light chain 3 pseudogene 2 pseudo : _no_value

name	Peli2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93834 MGI:1891445
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG624367 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624367 MGI:3647773
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	LOC100041831 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041831
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 30 mRNAs, 1611 ESTs, 22 Proteins

name	6720456H20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:218989 MGI:2443219
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930572G02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75943 MGI:1923193
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Otx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18424 MGI:97451
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041864 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041864
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 186 ESTs, 6 Proteins

name	LOC666972 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666972
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins pseudo : _no_value

name	Exoc5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105504 MGI:2145645
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4932432K03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74385 MGI:1921635
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC218997 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:218997
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins pseudo : _no_value

name	Nat12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70646 MGI:1922259
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700011H14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67082 MGI:1914332
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc35f4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75288 MGI:1922538
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	3632451O06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67419 MGI:1914669
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930447J18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94397050 GeneID:73961 MGI:1921211
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930447J18 gene transcript_id : XM_898953.2

name	Peli2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130804 GeneID:93834 MGI:1891445
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pellino 2 transcript_id : NM_033602.2

name	LOC100041831 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265501 GeneID:100041831
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 30 mRNAs, 1611 ESTs, 22 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) transcript_id : XM_001477082.1

name	6720456H20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254232 GeneID:218989 MGI:2443219
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6720456H20 gene transcript_id : NM_172600.2

name	4930572G02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265623 GeneID:75943 MGI:1923193
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 4930572G02 gene transcript_id : XM_001478734.1

name	Otx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66955882 GeneID:18424 MGI:97451
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : orthodenticle homolog 2 (Drosophila) transcript_id : NM_144841.2

name	LOC100041864 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265509 GeneID:100041864
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 186 ESTs, 6 Proteins product : similar to Rpl11 protein transcript_id : XM_001477137.1

name	Exoc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702356 GeneID:105504 MGI:2145645
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : exocyst complex component 5 transcript_id : NM_207214.2

name	4932432K03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142358095 GeneID:74385 MGI:1921635
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932432K03 gene transcript_id : NM_144535.3

name	Nat12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487476 GeneID:70646 MGI:1922259
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : N-acetyltransferase 12 transcript_id : NM_001081430.1

name	1700011H14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386951 GeneID:67082 MGI:1914332
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700011H14 gene transcript_id : NM_025956.3

name	Slc35f4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363008 GeneID:75288 MGI:1922538
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 35, member F4 transcript_id : NM_029238.2

name	3632451O06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802264 GeneID:67419 MGI:1914669
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 3632451O06 gene transcript_id : NM_026142.2

name	4930447J18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82954031 GeneID:73961 MGI:1921211
definition	codon_start : 1 product : hypothetical protein LOC73961 protein_id : XP_904046.1

name	Peli2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118130805 GeneID:93834 MGI:1891445
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : pellino 2 protein_id : NP_291080.2

name	LOC100041831 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265502 GeneID:100041831
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) protein_id : XP_001477132.1

name	6720456H20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254233 CCDS:CCDS26993.1 GeneID:218989 MGI:2443219
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC218989 protein_id : NP_766188.2

name	4930572G02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265624 GeneID:75943 MGI:1923193
definition	codon_start : 1 product : hypothetical protein LOC75943 protein_id : XP_001478784.1

name	Otx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21536266 GeneID:18424 MGI:97451
definition	GO_component : GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IDA] GO_process : GO:0009952 - anterior/posterior pattern formation [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IMP]; GO:0045165 - cell fate commitment [Evidence IMP]; GO:0001708 - cell fate specification [Evidence IMP]; GO:0007417 - central nervous system development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0009953 - dorsal/ventral pattern formation [Evidence IMP]; GO:0042706 - eye photoreceptor cell fate commitment [Evidence IMP]; GO:0030900 - forebrain development [Evidence IGI] [Evidence IMP]; GO:0030901 - midbrain development [Evidence IMP] [Evidence IGI]; GO:0030182 - neuron differentiation [Evidence IMP]; GO:0048663 - neuron fate commitment [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : orthodenticle homolog 2 protein_id : NP_659090.1

name	LOC100041864 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265510 GeneID:100041864
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477187.1

name	Exoc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46402177 GeneID:105504 MGI:2145645
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_process : GO:0006887 - exocytosis [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA]; GO:0048278 - vesicle docking [Evidence IEA] codon_start : 1 note : SEC10-like 1 product : exocyst complex component 5 protein_id : NP_997097.1

name	4932432K03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981704 CCDS:CCDS26995.1 GeneID:74385 MGI:1921635
definition	GO_component : GO:0030125 - clathrin vesicle coat [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC74385 protein_id : NP_653118.2

name	Nat12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487477 GeneID:70646 MGI:1922259
definition	GO_function : GO:0008080 - N-acetyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : N-acetyltransferase 12 protein_id : NP_001074899.1

name	1700011H14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981102 CCDS:CCDS26996.1 GeneID:67082 MGI:1914332
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC67082 protein_id : NP_080232.2

name	Slc35f4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037407 CCDS:CCDS26997.1 GeneID:75288 MGI:1922538
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : solute carrier family 35, member F4 protein_id : NP_083514.1

name	3632451O06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385650 GeneID:67419 MGI:1914669
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC67419 protein_id : NP_080418.1

name	EG624367 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149265364 GeneID:624367 MGI:3647773
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG624367 pseudo : _no_value transcript_id : XR_035094.1

name	LOC666972 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265625 GeneID:666972
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins product : similar to TATA box-binding protein-associated factor, RNA polymerase II, K, 18kD pseudo : _no_value transcript_id : XR_033884.1

name	LOC218997 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265514 GeneID:218997
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins product : similar to Ribosomal protein L19 pseudo : _no_value transcript_id : XR_033116.1

clone name	MSMg01-507J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111A24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-276O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438L17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-290J24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-290L16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-311F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085I18
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-351J10.T7 (MSMg01no351_j10.b1)	MSMg01-351J10.TJ (MSMg01no351_j10.g1)
ACC	AG462923	AG462924
length	815	817
length of high quality (start - end)	214 (52 - 265)	167 (84 - 250)
definition	CHROMAT_FILE: MSMg01no351_j10.b1 PHD_FILE: MSMg01no351_j10.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:43:52 2005	CHROMAT_FILE: MSMg01no351_j10.g1 PHD_FILE: MSMg01no351_j10.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:43:52 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TTTGTTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGG ATCCGCGGAATTCTCCAGGCTTTCCTCAAACTCCGAGATCTTCCTGCCTC AGCCTCCCAAGTGCTGAGATTAAAAATGTGCACCACCATGCATGGCTTTG CCTTGTGTGTTTTTGTTTTATTTTGTTATTATCATTGCTACTGCTGCTCT TGCTTTAAAAAAGGTTGTTTTTTTTTAATTTAATGGTGTGTGTGTGTGTG TGTGTGTGTGTGTGTGTGTGCGCCCCGTTCCTCATTTCTCGTTTCCCTTC TTCTTTCCGCTCCTTCTCTCCCTTCTCTTTTTTTTTTTTTTCCTCTTCCT TTCCCTGCCTGCTCGCTTCTTTTTTTTTCTCCCTCTCTCTCTCGCTGTTT TTTGTTCTCTTTTTTTCCTTCCCTCTCCCCTCCCCTTTCTTGCTTTCTTT TCTTTTCTCCCCCCCTTTTCTATTCCTTCTCTCTTCTCTTATTCTCTTCT TTTCCTCCTTTTTCTCTCTTCTTTTTCCTTTTCTTTCCTTTTCCCTCCTC TCTTTTTCGATTTCCCCCTTCTTCTCTCCATTTTTGTCTGTCCTTCCATA TTCTTTACCTTCATTTCTCTTCTTTTCCCTTATTTCTTCCCCTCCTCCTA TTTCACTTTCTCTGTTATTATTACCTCCCACAATCTTTTTTACTATTTAC TAATATAACTTTTCACTCTCCTCTTTTTCTCTCTTTTCTTGTTCATTTAT TCTATTTCTTTTAATAGTTACCCTCCTTCATTCTATATATTCTTCTATCC CATCCCATATTTTTG	NTTTTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGAGATCTGTCTGCC CCTGCCTCCTGAATGCTGGAATTAAAGGCATGTGCCACCACCATCTAACT TAGACTACATTTTCTTAAAGGCTATAGAGATGGCCTGTTAGTAAAACGCT TGCCGTATAAGCATGATTTCCTGCACTTGTATAAAAAGCTGGTCACAGAA AAGCAGAANANGNNCNTTTTTTGGNNTTNNANGGGGTTTTAAACCCTTTC CCCCGCGGTTTGTGGGGCCCCCGGGNNAAAAGGGGAAAAAAGGTTAGAAA GAACCAGGGGGGTGGGGGAAAATCCATTTGCGGAGAGCTTTTCCCCAAAC CTGGGGGGCCCCCAAGGTCTCCCCAGAGNGTTCCCCCTATAAAGAGCCCT TTTTTTTTAAAAAAGGGGCCCCCACCGGTCTTTGTAAAAAATCAGAGATN TCNCCTCCCCCACAAACAAAAAAAAGGAGCGTCGTCCTGTCTCCCCCCCC CCCCCCTTCCTCTAACAAAATATAAATTAACGTGCCGTGGCGGGCTGAGG GAGCCTGTCGCTCCCGTATCGATCAATGAAAAAAAAATTATANCCAATCC ATACCATTATTCGAACTTTCGTACCCATAAATATTTATTATCCCACCATT CTCTGTNNGCATCTCTCACCCTTCTCACTTTTTCCTCCTCCTTAATCTTG GGGCCATAGTCGTCCCCCCCCTACCCTCTCCTNNCCTTTTCTTCTCTATA ATCAAAAAAAATAAAAG
quality values	Open. Hide. 10 10 10 10 16 8 8 8 10 13 8 8 8 8 10 10 22 28 33 32 30 28 28 30 32 29 30 31 39 33 33 39 43 26 26 31 31 30 29 31 21 22 11 12 10 9 9 9 8 9 10 13 19 23 47 47 47 30 30 28 28 31 31 39 37 37 37 37 21 23 11 13 12 15 12 15 12 25 25 37 47 48 48 47 47 38 38 42 42 42 53 59 57 57 57 57 57 53 57 57 43 43 57 59 68 51 51 50 50 50 50 68 68 68 68 68 42 42 41 41 41 50 59 50 50 50 50 50 46 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 59 59 59 59 57 57 68 68 57 57 68 68 68 68 68 68 68 57 59 59 59 57 54 54 54 59 59 59 47 47 37 37 35 41 33 37 35 39 39 43 43 24 24 12 12 11 15 11 16 10 9 9 8 11 8 8 8 8 8 8 8 8 6 6 8 8 10 10 10 8 8 8 6 6 8 8 9 10 10 8 8 8 8 12 8 10 12 12 11 11 13 10 8 8 8 8 6 6 8 7 8 8 9 8 8 9 9 9 8 8 9 8 8 8 11 11 8 8 8 8 8 8 8 11 11 8 10 10 13 8 8 8 8 8 8 9 9 9 10 6 6 8 6 6 8 9 9 9 10 15 19 22 22 17 15 9 9 11 27 19 15 17 10 10 10 8 8 8 8 8 8 8 8 8 8 11 9 12 10 8 8 8 8 8 8 8 8 8 8 13 13 12 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 12 8 8 6 6 13 21 12 8 8 8 8 8 8 9 9 10 10 10 10 9 9 8 11 9 13 13 8 8 10 11 11 10 17 24 22 22 13 10 10 8 8 8 11 10 10 10 10 9 12 10 9 8 8 8 8 8 10 8 8 8 8 8 8 8 8 9 12 16 10 10 10 19 16 13 9 8 8 8 8 10 14 11 8 8 8 8 8 8 10 12 13 10 9 8 8 8 8 12 12 19 18 12 11 10 11 11 8 8 8 11 12 10 13 11 9 9 10 10 19 16 11 9 10 10 10 10 10 10 7 7 7 10 9 14 15 15 18 17 11 10 11 8 12 8 8 8 8 8 8 8 8 8 8 10 9 9 8 8 8 8 9 9 9 8 10 6 6 8 8 8 9 8 10 10 12 10 8 6 6 8 8 10 12 15 15 12 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 8 8 11 12 12 11 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 9 9 9 12 12 14 14 12 11 12 11 11 11 9 9 9 9 9 10 11 11 9 9 9 9 9 9 16 11 11 11 11 12 16 12 8 9 7 8 8 8 9 10 10 8 13 8 8 9 10 11 10 10 8 8 8 8 8 8 8 7 7 10 7 7 13 8 8 8 8 10 10 13 13 11 11 10 10 10 10 12 8 9 8 15 11 8 8 8 10 8 8 9 10 10 13 10 16 15 18 12 13 8 8 8 8 8 12 10 10 9 8 8 7 7 8 10 12 12 15 8 6 6 10 8 11 11 12 8 8 8 8 8 8 6 8 8 10 10 8 8 8 8 8 8 8 12 12 12 11 8 8 8	Open. Hide. 0 3 7 7 9 9 7 7 6 6 8 13 10 10 9 9 15 17 34 30 37 31 25 26 35 43 44 41 41 39 39 39 39 37 44 44 39 27 19 10 7 7 7 9 9 9 11 18 19 34 26 39 39 43 48 39 39 47 39 42 57 57 59 57 57 53 53 35 29 14 19 10 10 10 15 17 21 14 32 32 41 41 42 46 68 68 68 50 51 50 50 50 50 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 51 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 54 59 54 59 59 68 68 68 68 68 68 68 68 68 57 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 50 50 53 53 53 53 59 59 59 59 59 48 47 46 59 59 59 44 22 9 9 9 9 9 19 32 22 8 8 3 0 3 0 3 0 0 3 0 3 13 13 19 10 10 10 3 0 0 3 3 0 0 3 0 3 10 10 10 11 10 9 10 10 11 10 17 17 15 9 9 9 9 13 17 14 10 8 8 8 10 8 8 8 6 7 7 9 8 8 8 10 15 9 8 8 9 3 0 0 3 7 7 9 18 22 19 10 10 12 11 11 8 11 11 8 8 9 9 8 8 8 11 12 10 9 8 8 8 8 10 17 13 7 6 6 6 7 7 12 11 13 10 8 8 7 8 8 9 9 7 7 6 6 6 8 8 8 8 8 8 8 8 9 9 9 10 11 11 10 10 11 12 12 12 12 15 20 15 11 10 10 9 11 11 12 13 11 12 8 6 6 6 8 6 8 8 8 8 8 3 0 3 6 8 8 8 10 10 8 8 8 8 8 8 6 6 6 10 8 8 8 8 8 9 11 10 10 8 6 6 6 8 8 8 13 8 8 8 8 9 9 9 9 10 10 8 8 8 6 8 6 6 8 8 9 9 9 11 10 10 10 8 10 6 6 8 6 8 8 10 3 0 3 3 0 3 8 8 9 9 18 10 7 6 6 6 6 8 7 7 13 12 14 14 12 9 9 10 9 8 8 10 8 10 8 8 8 8 8 8 8 8 8 8 8 13 8 9 17 19 20 22 21 21 25 16 13 10 8 8 10 8 8 8 8 8 8 8 8 10 10 11 11 11 10 6 6 8 8 8 8 8 9 9 9 11 9 9 9 8 8 8 8 8 8 10 8 8 8 8 7 8 9 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 13 8 8 6 6 10 8 6 9 9 9 10 13 10 8 9 10 9 11 10 11 6 8 7 3 0 3 8 8 8 8 8 8 8 8 8 8 11 13 10 10 9 8 8 8 8 8 8 10 10 11 12 9 6 6 6 8 8 8 6 6 8 8 9 12 15 13 13 10 9 9 10 8 10 10 10 10 7 7 8 8 9 10 12 12 12 9 9 3 0 0 3 8 8 8 6 6 8 8 8 8 8 8 8 10 12 7 6 8 8 8 8 10 12 18 13 9 9 9 8 8 8 8 8 10 10 6 6 8 8 8 6 6 6 8 9 10 8 8 10 8 8 6 6 6 7 7 8 8 9 10 10 10 10 10 13 17 11 11 9 9 8 8 8 3 0 0 3 9 9 10 12 10 9 9 10 15 12 12 9 9 9 9 9 11 11 12 11 11 11 10 8 8 8 6 6 10 10 6 6

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no351_j10.g1 MSMg01no351_j10.g1 CHROMAT_FILE:
MSMg01no351_j10.g1 PHD_FILE: MSMg01no351_j10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:52 2005
         (167 letters)



>mm_chr14_49382406_49382972
          Length = 567

 Score =  323 bits (167), Expect = 3e-93
 Identities = 167/167 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   agagagatctgtctgcccctgcctcctgaatgctggaattaaaggcatgtgccaccacca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 agagagatctgtctgcccctgcctcctgaatgctggaattaaaggcatgtgccaccacca 375

                                                                       
Query: 61  tctaacttagactacattttcttaaaggctatagagatggcctgttagtaaaacgcttgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tctaacttagactacattttcttaaaggctatagagatggcctgttagtaaaacgcttgc 315

                                                          
Query: 121 cgtataagcatgatttcctgcacttgtataaaaagctggtcacagaa 167
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 cgtataagcatgatttcctgcacttgtataaaaagctggtcacagaa 268


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 167
Length of database: 567
Length adjustment: 8
Effective length of query: 159
Effective length of database: 559
Effective search space:    88881
Effective search space used:    88881
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information