Query= MSMg01no354_e05.b1 MSMg01no354_e05.b1 CHROMAT_FILE:
MSMg01no354_e05.b1 PHD_FILE: MSMg01no354_e05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:22 2005
(526 letters)
>mm_chr14_78598849_78599772
Length = 924
Score = 337 bits (174), Expect = 2e-96
Identities = 195/206 (94%), Gaps = 9/206 (4%)
Strand = Plus / Minus
Query: 326 tcctcacagccttctgatcaagatgcagaactc---ctccagcactgtgtttttctggat 382
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 799 tcctcacagccttctgatcaagatgcagaactccttctccagcactgtgtttgtctggat 740
Query: 383 gctgccatgcttcccattgcgaagggctgctccaccatctccaggaacaggttcaagaac 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gctgccatgcttcccattgcgaagggctgctccaccatctccaggaacaggttcaagaac 680
Query: 443 accacatactttttgatggcaaacagtcagtacaatcttggtatttggaagcctgaactg 502
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 679 accacatactttttgatggcaaacagtcagtacaatcttggtattt----gcctgaactg 624
Query: 503 ttcatt--cagtaattgatatcgatg 526
|||||| ||||| ||||||||||||
Sbjct: 623 ttcattcacagtatttgatatcgatg 598
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 924
Length adjustment: 10
Effective length of query: 516
Effective length of database: 914
Effective search space: 471624
Effective search space used: 471624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no354_e05.g1 MSMg01no354_e05.g1 CHROMAT_FILE:
MSMg01no354_e05.g1 PHD_FILE: MSMg01no354_e05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:22 2005
(295 letters)
>mm_chr14_78461474_78462168
Length = 695
Score = 555 bits (287), Expect = e-162
Identities = 293/295 (99%)
Strand = Plus / Plus
Query: 1 cagagcacgtgtctgttttagaacagtgtgccctcagtgggaacataaatcacactgact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagagcacgtgtctgttttagaacagtgtgccctcagtgggaacataaatcacactgact 260
Query: 61 tactgaattcacaaagtcggcctcactaagcctttggcaccctgtagcatttccaggctg 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tactgaattcacaaagtcagcctcactaagcctttggcaccctgtagcatttccaggctg 320
Query: 121 cctgtgagccgtgagtagcatggtgtcaggagtgtgataagaggggtacaggagaagcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctgtgagccgtgagtagcatggtgtcaggagtgtgataagaggggtacaggagaagcct 380
Query: 181 cacgtgacctctcgtcaagaacacaccacagaactaatgcatttccaaaagtagaacccg 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 381 cacgtgacctctcgtcaagaacacaccacagaactaatgcatatccaaaagtagaacccg 440
Query: 241 tgtctaaaggtattatatgatggtgatggtgatgatgatgatggtgatggtgatg 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtctaaaggtattatatgatggtgatggtgatgatgatgatggtgatggtgatg 495
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
