Query= MSMg01no354_i23.b1 MSMg01no354_i23.b1 CHROMAT_FILE:
MSMg01no354_i23.b1 PHD_FILE: MSMg01no354_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:44 2005
(529 letters)
>mm_chr14_97178768_97179695
Length = 928
Score = 876 bits (453), Expect = 0.0
Identities = 503/527 (95%), Gaps = 14/527 (2%)
Strand = Plus / Plus
Query: 5 gaattcattggtctagtaaaactgcaaagaaaatgtgggaaaagccaatgaaatgcaact 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattggtctagtaaaactgcaaagaaaatgtgggaaaagccaatgaaatgcaact 264
Query: 65 caggatttatcattgaaaattgaaagtgcatcaatttaatttgccttctattagtttgtt 124
||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||||||
Sbjct: 265 caggatttaccattgaaaactggaagtgcatcaatttaatttgccttcaattagtttgtt 324
Query: 125 gtatacatagtaactaggtgatgtaataaaaggaccaaatttgatgaaaacaaaacaaaa 184
||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 325 gtatacatagtaactaggtgatgtaataaaaggaccaaagttgatgaaaac--------- 375
Query: 185 aaaaaaaaaaaa--cacctaattctatgcattgtatgttctatgcagcataaatgtggtt 242
|||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 376 --aaaaaaaaaatgcacctaattctatgtattgtatgttctatgcagcataaatgtgttt 433
Query: 243 atatttgattaaaaataaaggaattagaatttagagattggctttcctggtcaaatcata 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 atatttgattaaaaataaaggaattagaatttagagattggctttcctggtcaaatcata 493
Query: 303 attgtttttactgtaactaagcacctgtctcagatatgtaacctttgtaaatacttttgg 362
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 494 attgtttttactgtaactaagcacctatctcagatatgtaacctttgtaaatacttttgg 553
Query: 363 tactacattccatattaagcattaggcagtcactgttttgattctccttatgtcaagttc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tactacattccatattaagcattaggcagtcactgttttgattctccttatgtcaagttc 613
Query: 423 atgttttctacttttttttagtttagtgattttattgttgtgaagagatggtacaaccaa 482
||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct: 614 atgttttctacttatttt-agtttagtgattttattgtcgtgaagagatggtacaaccaa 672
Query: 483 gacatttcttataatgaaaattacttaattgagcctggattacagtt 529
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 gacatttcttataatgaaaattacttaattgagcctggattacagtt 719
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 928
Length adjustment: 10
Effective length of query: 519
Effective length of database: 918
Effective search space: 476442
Effective search space used: 476442
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no354_i23.g1 MSMg01no354_i23.g1 CHROMAT_FILE:
MSMg01no354_i23.g1 PHD_FILE: MSMg01no354_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:45 2005
(498 letters)
>mm_chr14_97355965_97356862
Length = 898
Score = 876 bits (453), Expect = 0.0
Identities = 453/453 (100%)
Strand = Plus / Minus
Query: 1 ttgcttctgttaaagttgaaatcaagttgaatacattaagaaccttgagaacatagatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 ttgcttctgttaaagttgaaatcaagttgaatacattaagaaccttgagaacatagatta 394
Query: 61 atatattgtgcaaatacatacatgattattaaactattagtacactgaaatgtgtaacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 atatattgtgcaaatacatacatgattattaaactattagtacactgaaatgtgtaacac 334
Query: 121 caaagatggagaaaaaaatgttaaaagaaactaatactaacattcagtagtgaggaacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 caaagatggagaaaaaaatgttaaaagaaactaatactaacattcagtagtgaggaacct 274
Query: 181 cataattactaaatatttgttttttaggtattttctttgaatataatcccatgacaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cataattactaaatatttgttttttaggtattttctttgaatataatcccatgacaatat 214
Query: 241 actttttcttatcaataaattatttttaaaaaattaagatactcataaaacatttaagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 actttttcttatcaataaattatttttaaaaaattaagatactcataaaacatttaagga 154
Query: 301 aagaaatctttctgcattttattgatagttgtatcagttgcatcttatctttttctaagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 aagaaatctttctgcattttattgatagttgtatcagttgcatcttatctttttctaagt 94
Query: 361 acataacttatctgacatgtacggtatttttatggaaatcttcagttcttcaacactctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 acataacttatctgacatgtacggtatttttatggaaatcttcagttcttcaacactctt 34
Query: 421 gatttaagttctaccagcccacactttcgctaa 453
|||||||||||||||||||||||||||||||||
Sbjct: 33 gatttaagttctaccagcccacactttcgctaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
