XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
ACTTGGTTTAGCTAAATCAAGTGTACAAATGGCCTCCAAATGTTTAGGTA
ATTGTTCTCAACTACTGAGTATGTGAGTGCATACTTTTCCACTTCCCTCT
AAGATACAGCTATTTTCAGCTAAAAGACTTATGTCTATAATCTTACCACA
CAAAATAAAATCACTCATTCTGTTTATCTCTCCCTAGGGGACTTTTAATA
TTGCTTTTACAGGTAGCAATGTTCATCCTCCATCAAAATACAGACAGCCA
TATTTATCTCAACCATCATCTTATAAAGGTTTCCATGGATACGGAAAATT
ATTTTTCTGGATTTTTTTTTTCACACATCCATTACCACTAGAGAACTAGA
AGATTGGGGCCAGTAGCAGATTTAGAATGCCTTTCCAGATCACAATGGCA
TCCCCTAACTTTCCTGTCTGCTTGATAGTGAAATTATAAAGGCTGCTGTT
TGCTTCCTTCTGCATTTGAGCATTGGATTTTGAAGCGGTCTTGAAACTTT
CTCTGAATTTTGCCATCTGTTCTGTTATAGCTTCATCTTAGGATATTTAT
TACCCCTCATTTGCCTCGCTGAGACAGTCTCTGACTATATGATAAACTTC
TACTGCTTTTCTTTCGTGATTTCTCATGCGTCGACGTTTCATCCCCGAAA
CTTCCATTCTTATTATCTTCTTTTCCTACGCCACCCCCTCCCTATCTTCA
ACCCACTTTTTCCCTGCTCCTG

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCAACTGCCACCATCTAGGTTCAACTGCAAA
TGGATCCGTGCTTTCAACATAAGGTCAAATACTCTAATTCTTCTTGTTCA
GACATGGATGCTATGTCTGAATCTGTAGATGTGTGTTTGAGTTGGAGTTC
TCCTTGATGTCAGGAAACCCACATGGAGTGTGAGTAACTCATATGGAGTA
ACATTATTGCTACTGTTGCTCTAGTGAATGTTTCCTCATAGGCTTTAACT
GTAGCTTGCGAGTTCTTTTTTCAGATAAGACTGATAATTCTTTTCTTCCT
TGGAAACTGTTTATCACTTTTCAGTACTATCAAAAACAGCAAGTATAGAT
GAAGCTGCCCAGTCTGTACCATCATGATTTCTCAATAGACTGTGATTCAG
ACATAAAATATATGATGTATTCTGCAATAATTTCTTTCTTTCTAGTACTG
GATGGTATCCTTTAAGCATCATTCCTACTCTGTGATATTTGTCCACCTTT
TTTTACCTTTGACCTTCACCACCAATTTTTGATAATATATTTATTGTTGG
CCGTACCACCTCTTATTGTTATTCCTTAGTTTTCTTATCATTACATCTTG
GAATTCTCCTATTTTTGTTTTTGTTATCTCCTACCTTTATTTCTTCTTCT
TTTCTTTATTTCTAAGTCTTCTCTAATTCTCTATTCTTTTTCTATTCGCA
CCTATTTGTATATCTCCTCTATTTTTCTTCTTCCTCTCTTTTATCTCTTC
TCTCTTTTATT

Query= MSMg01no355_i05.b1 MSMg01no355_i05.b1 CHROMAT_FILE:
MSMg01no355_i05.b1 PHD_FILE: MSMg01no355_i05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:59 2005
         (254 letters)



>mm_chr14_92508460_92509113
          Length = 654

 Score =  491 bits (254), Expect = e-143
 Identities = 254/254 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaatcaagtgtacaaatggcctccaaatgtttaggtaattgttctcaactactgagtatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatcaagtgtacaaatggcctccaaatgtttaggtaattgttctcaactactgagtatg 260

                                                                       
Query: 61  tgagtgcatacttttccacttccctctaagatacagctattttcagctaaaagacttatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagtgcatacttttccacttccctctaagatacagctattttcagctaaaagacttatg 320

                                                                       
Query: 121 tctataatcttaccacacaaaataaaatcactcattctgtttatctctccctaggggact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctataatcttaccacacaaaataaaatcactcattctgtttatctctccctaggggact 380

                                                                       
Query: 181 tttaatattgcttttacaggtagcaatgttcatcctccatcaaaatacagacagccatat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttaatattgcttttacaggtagcaatgttcatcctccatcaaaatacagacagccatat 440

                         
Query: 241 ttatctcaaccatc 254
           ||||||||||||||
Sbjct: 441 ttatctcaaccatc 454


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 654
Length adjustment: 9
Effective length of query: 245
Effective length of database: 645
Effective search space:   158025
Effective search space used:   158025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no355_i05.g1 MSMg01no355_i05.g1 CHROMAT_FILE:
MSMg01no355_i05.g1 PHD_FILE: MSMg01no355_i05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:59 2005
         (245 letters)



>mm_chr14_92674444_92675088
          Length = 645

 Score =  474 bits (245), Expect = e-138
 Identities = 245/245 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   caactgccaccatctaggttcaactgcaaatggatccgtgctttcaacataaggtcaaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caactgccaccatctaggttcaactgcaaatggatccgtgctttcaacataaggtcaaat 386

                                                                       
Query: 61  actctaattcttcttgttcagacatggatgctatgtctgaatctgtagatgtgtgtttga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actctaattcttcttgttcagacatggatgctatgtctgaatctgtagatgtgtgtttga 326

                                                                       
Query: 121 gttggagttctccttgatgtcaggaaacccacatggagtgtgagtaactcatatggagta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gttggagttctccttgatgtcaggaaacccacatggagtgtgagtaactcatatggagta 266

                                                                       
Query: 181 acattattgctactgttgctctagtgaatgtttcctcataggctttaactgtagcttgcg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acattattgctactgttgctctagtgaatgtttcctcataggctttaactgtagcttgcg 206

                
Query: 241 agttc 245
           |||||
Sbjct: 205 agttc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space:   150096
Effective search space used:   150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)