Query= MSMg01no355_n18.b1 MSMg01no355_n18.b1 CHROMAT_FILE:
MSMg01no355_n18.b1 PHD_FILE: MSMg01no355_n18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:25 2005
(485 letters)
>mm_chr14_33365642_33366526
Length = 885
Score = 930 bits (481), Expect = 0.0
Identities = 485/487 (99%), Gaps = 2/487 (0%)
Strand = Plus / Plus
Query: 1 tggcctccattcagagtggcagttctgcatgaaacaggttcctacacccacaaaaaggta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 tggcctccattcagagtggcagttctgcatgaaacaggttcctacacccacaaaaaggta 258
Query: 61 atggtgcagtgagaagctacatatttgaccttttttccctttcaaatgtgcttatgtata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 atggtgcagtgagaagctacatatttgaccttttttccctttcaaatgtgcttatgtata 318
Query: 121 tttctttcattttaacttatttaattattgacttgtaacttcatattatcaaacagatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tttctttcattttaacttatttaattattgacttgtaacttcatattatcaaacagatat 378
Query: 181 gaacaaaggctttcttttttctttttggttttttttcaagacagggtttctctgtatagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gaacaaaggctttcttttttctttttggttttttttcaagacagggtttctctgtatagc 438
Query: 241 cttggctgtcctggaactcactctctgtagctcaggctggccttgaactcagaaatccgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cttggctgtcctggaactcactctctgtagctcaggctggccttgaactcagaaatccgc 498
Query: 301 ctgcctctgcctcccaagtgctaggaccaaaggcgtgcaccaccactgccaggcaaaca- 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ctgcctctgcctcccaagtgctaggaccaaaggcgtgcaccaccactgccaggcaaacaa 558
Query: 360 -ggctttcttgttaatagtctggtagtatgatttgatgtccaacaaagcatagctgggca 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aggctttcttgttaatagtctggtagtatgatttgatgtccaacaaagcatagctgggca 618
Query: 419 cagacagggggccacaggccgaccgtatgcatgggatcacaaatctacatggcagtttac 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 cagacagggggccacaggccgaccgtatgcatgggatcacaaatctacatggcagtttac 678
Query: 479 tggaggg 485
|||||||
Sbjct: 679 tggaggg 685
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_n18.g1 MSMg01no355_n18.g1 CHROMAT_FILE:
MSMg01no355_n18.g1 PHD_FILE: MSMg01no355_n18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:25 2005
(458 letters)
>mm_chr14_33529775_33530632
Length = 858
Score = 826 bits (427), Expect = 0.0
Identities = 451/459 (98%), Gaps = 2/459 (0%)
Strand = Plus / Minus
Query: 1 aataccagcttgatctacatagtgagttctaggctagccaagactacataatgagaaatt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 809 aataccagcttgatctacatagtgagttctaggctagccaagactacataatgagaaact 750
Query: 61 gtcaaagaagaaaaaggaaggggggagggagagcaggagagggtaagaaagaggaagaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 gtcaaagaagaaaaaggaaggggggagggagagcaggagagggtaagaaagaggaagaag 690
Query: 121 aaaagaacaagaaaaacaaaaacaagaagaactctgtctagttatctttccttcatcgca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 689 aaaagaacaagaaaaacaaaaacaagaagaactctgtctagttatctttcctccatcgca 630
Query: 181 gggagtgatcaaaggcctcggggcacctgttctgagagcctagctttaggtgtctgaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gggagtgatcaaaggcctcggggcacctgttctgagagcctagctttaggtgtctgaaga 570
Query: 241 cccagagccaaagcctggggtgaacagcaggccatcatttatctgtgatgtcttcatact 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 569 cccagagccaaagcctggggtgaacagcaggccattatttatctgtgatgtcttcatact 510
Query: 301 cagggccgcgcatggtcaacctgatggaaagtttagtttttcctcttgagactagtgga- 359
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 509 cagggccgcgcatggtcaacctgatggaaagtctagtttttcctcttgagactagt-gac 451
Query: 360 aatctcttaccaccgcaactgcgtgagttggtgattcaggagggacttgaaagaaaccaa 419
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aatctcttaccactgcaactgcgtgagttggtgattcaggagggacttgaaagaaaccaa 391
Query: 420 ctttgctgatttctgtgggcatggatggactggatgtgg 458
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 390 ctttgctgatttctgtgggcgtggatggactggatgtgg 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
