XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
ATATTTTTCTCAATGTCTTCCAAAATATTCCTTGTATCTCTTCAAGTACA
TGCCCTTGAATATTTGATTTTGATATTGAAGCCAGAGACAATCATTTGGA
ATCATTCTAAGACTAGAAATGTCACAGTACTTGCCTCTGATGAATTAAGA
GTGGCATTGATGAACTGAATAGTCTACTCAACTGAAAAAAGAACAGTTAA
AATTAAGCAATATTTCTAGCACCCATTTGCCTATTCTTGGTTACATATAA
TTCAGGAACTTTAAATCCTTAAAGATCCCAATGTTTTCATAAAAGATTAT
GAATATAGCTATATATAATGCAAGTAAGTCAGTATTTTCCTTTTTAGAGA
TTTTAAAGCAAGCAGAGATTCTAATTTTTTTTTAAGTTTCATAAAGAGAA
GTATCGTTCTTCTGAAATTTCATGGTGTTACCAAAAATGGAAAACATATG
GGGACAGTGGAGTTACTGTTCTACTCCAACTTTTTTTTTTTTTTTTTTGG
TTTTTCGAGACAGGGTTTCTCTCTGCAGTCCTGAATGTCCTGGAACTCAC
TCTATAGACCAGGCTGGACTCGAACTCACAAATCTGCCTGGTTCCACCTC
CCAAGAGGTTGGATTAAAGGGGAGAACCACCCCGGGCCGTGTTACTCCAA
TTTTTTGTGAAAAGAAATAAAAATTTTCCCGTTGGANAATGGGAAGGACC
GGGTCTTTGACTCTTTT

GCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATGTCTGTAGATGCATATGTAGCAGAGGA
TGGCCTAGTCAGTAAACAATGGGAGGAGAGGCCCTTGGTAGTGTGAAGGT
TCTATGCTTCAGTATAGGGGGATGCCAGGGTCATGAAGGGGGAGTGGGTG
GGTTGGTGAGCAGGAGGAGGGGGGCGAGGATAGGCGACTTTCGCAGGGGA
TTCTATCATAGGGTATAACTTTTGCTTGTACTTCCCGCATCTGTCTCACA
TAACTGCGATGTCACTAGTTTTTGTTCTCTTGTTAACCCTTTTTTACTTT
ATGCCTGCACGATAATATAACTTATCTTATGAATTTCTTTTATGTCTAGT
TTGTCTTATGTCCACCCACTTTCATTTTACTCCTCCTTCCCCCCTATCCC
CTTGGTTAGCACGTTCTTTATGCTTATATCCTCGGACCCTTTTCCTCTTT
TTCTCTTATTTCTTATTTCTTTTTCCTCTTCTGCTATATCTTATTTTTTT
ATTTTTTCCCTCCCCTTCTATCCTTTTTTCTCTTTAATCTGCCTTTATTC
CCCCCACCATTTCTCCCCCCCCCCCTTCATTCGCTTATTTCACCTTTTCC
ATCTTTTCCTCTGTCATTAGTCATACTCTCATCTTATTCCCCTCTTTTTT
CTATCCTACTCCTCTTTCCTCCTTTTATCTCTCTTACTTTACTTTCCAAT
GTCCTTCTTCTTCTGTCTCTAAACTTTGTAGTTCTTACTCTCTCCTCNTT
GTCTCCTCTCGCTCTACTTTATCACTCATCTN

Query= MSMg01no357_h19.b1 MSMg01no357_h19.b1 CHROMAT_FILE:
MSMg01no357_h19.b1 PHD_FILE: MSMg01no357_h19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:29 2005
         (511 letters)



>mm_chr14_109235811_109236725
          Length = 915

 Score =  878 bits (454), Expect = 0.0
 Identities = 493/508 (97%), Gaps = 4/508 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatatttttctcaatgtcttccaaaatattccttgtatctcttcaagtacatgcc 64
           |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 205 gaattcatatttttctaaatgtcttccaaagtattccttgtatctcttcaagtacatgcc 264

                                                                       
Query: 65  cttgaatatttgattttgatattgaagccagagacaatcatttggaatcattctaagact 124
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 265 cttgaatatttgattttgatattgaagccagagacaatcatttggaatcgttctaagact 324

                                                                       
Query: 125 agaaatgtcacagtacttgcctctgatgaattaagagtggcattgatgaactgaatagtc 184
           |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 325 agaaatgtcatagtacttgcctctgatgaattaagagtggcattgatgaattgaatagtc 384

                                                                       
Query: 185 tactcaactgaaaaaagaacagttaaaattaagcaatatttctagcacccatttgcctat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tactcaactgaaaaaagaacagttaaaattaagcaatatttctagcacccatttgcctat 444

                                                                       
Query: 245 tcttggttacatataattcaggaactttaaatccttaaagatcccaatgttttcataaaa 304
           |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 445 tcttggttacatattattcaggaaatttaaatccttaaagatcccaatgttttcataaaa 504

                                                                       
Query: 305 gattatgaatatagctatatataatgcaagtaagtcagtattttcctttttagagatttt 364
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gattgtgaatatagctatatataatgcaagtaagtcagtattttcctttttagagatttt 564

                                                                       
Query: 365 aaagcaagcagagattctaattttttttt----aagtttcataaagagaagtatcgttct 420
           |||||||||||||||||||||||||||||    |||||||||||||||||||||||||||
Sbjct: 565 aaagcaagcagagattctaatttttttttttttaagtttcataaagagaagtatcgttct 624

                                                                       
Query: 421 tctgaaatttcatggtgttaccaaaaatggaaaacatatggggacagtggagttactgtt 480
           ||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||
Sbjct: 625 tctgaaatttcatggtgttaccaaaaatgaaaaacatatggggatactggagttactgtt 684

                                       
Query: 481 ctactccaactttttttttttttttttt 508
           ||||||||||||||||||||||||||||
Sbjct: 685 ctactccaactttttttttttttttttt 712


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 915
Length adjustment: 10
Effective length of query: 501
Effective length of database: 905
Effective search space:   453405
Effective search space used:   453405
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)