Query= MSMg01no357_i21.b1 MSMg01no357_i21.b1 CHROMAT_FILE:
MSMg01no357_i21.b1 PHD_FILE: MSMg01no357_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:35 2005
(472 letters)
>mm_chr14_95074117_95074988
Length = 872
Score = 891 bits (461), Expect = 0.0
Identities = 467/469 (99%), Gaps = 2/469 (0%)
Strand = Plus / Plus
Query: 5 gaattctaagggagtataacatgttaatgatgtcttatagctgtgaattctttgttaaca 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaagggag-ataacatgttaatgatgtcttatagctgtgaattctttgttaaca 263
Query: 65 caggaccctgtatcttaccttaattttcattttaccttatagttgaaggttgcttcccat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caggaccctgtatcttaccttaattttcattttaccttatagttgaaggttgcttcccat 323
Query: 125 gtctccattctcaaagaaataggattacaagcatgaattaccatgaaaaatatgttatcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtctccattctcaaagaaataggattacaagcatgaattaccatgaaaaatatgttatcc 383
Query: 185 tgaagcaaaagctaaggccttcatgtatggtagagaagaactcctactaactgcactccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgaagcaaaagctaaggccttcatgtatggtagagaagaactcctactaactgcactccc 443
Query: 245 ttttagaaaaaaaaaaaa-gcctttttattaaagtttgactttgttttatccaatacaga 303
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttttagaaaaaaaaaaaaagcctttttattaaagtttgactttgttttatccaatacaga 503
Query: 304 tgaaagtaaagaaatcttcttttttaatattttttattattacgtattttcgtcaataca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgaaagtaaagaaatcttcttttttaatattttttattattacgtattttcgtcaataca 563
Query: 364 tttagaatgctatcccaaaagtcccccataccttccccccgacttccctacccacccatt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttagaatgctatcccaaaagtcccccataccttccccccgacttccctacccacccatt 623
Query: 424 cccattttttggccctggcattcccctgtactgggacatataaagtttg 472
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cccattttttggccctggcattcccctgtactgggacatataaagtttg 672
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_i21.g1 MSMg01no357_i21.g1 CHROMAT_FILE:
MSMg01no357_i21.g1 PHD_FILE: MSMg01no357_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:35 2005
(412 letters)
>mm_chr14_95164857_95165668
Length = 812
Score = 710 bits (367), Expect = 0.0
Identities = 369/370 (99%)
Strand = Plus / Minus
Query: 43 acttgaaggttcttctgttttgtttttaattttttgttttttctttgtttgtctttgctt 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 acttgaaggttcttctgttttgtttttaattttttgttttttctttgtttgtctttgctt 753
Query: 103 ttctgaaacaaggtctctctatgtagcccctggctctcctggagatccctatatggacct 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 ttctgaaacaaggtctctctatgtagcccctggctctcctggagatccctatatggacct 693
Query: 163 ggctggtttcaaactcacagagatcctcctgcttctgctttgtgagtgttgtgatttaag 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ggctggtttcaaactcacagagatcctcctgcttctgctttgtgagtgttgtgatttaag 633
Query: 223 gcgtgtcaccaggcccagctaaggttctttttctgaacctaggattaaggtgtttttacc 282
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gcgtgtcaccaggcccagctaaggttctttttctgaacctaggattaaggtgtttttacc 573
Query: 283 ttcctcgaacctcactatggtattaaacatcagtcacagagccttggcaccattaaacat 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ttcctcgaacctcactatggtattaaacatcagtcacagagccttggcaccattaaacat 513
Query: 343 catccattcctgaatggcagtctccatttttctctccacatgtctcatagnttataaaaa 402
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 512 catccattcctgaatggcagtctccatttttctctccacatgtctcatagtttataaaaa 453
Query: 403 tctatgagga 412
||||||||||
Sbjct: 452 tctatgagga 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
