XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCATG
ACTGCCTCCCTGAGCTCAGCCAAGGAAGGCGCTCACAGGCAGTAATGGGC
TGACCCGACTCATAAATGTGGAAGCTCAGAGAAAAACACAACCACTTTAG
GGGGCAGAGAGTATTCCTGGTTGTCTTGATTTTCATCACTCTAACATATT
CACCGTTGAGGAACATGCGCTCCGAAGCAACAGACTGTGGAGTTTAAGGC
TCTCCCTGCCAGCTGGGCAGGCAGCAGAGAGTACGCATGGCCGTGAGGAC
CCAGGTTTGCTGTTCTGCGCTCACGTTGGCAGGCTCTCACTCACCGGTAA
CTCCAGCTCCAAGGATGCTCTCTTCTGGCCTCTGCGGGCACCAGGCACAC
AGATGATCCATATACGTACATGCAGACAAACACTCATATACATAAACAAA
AATAAACACATCTGTAAAAAGAAAAAAGACCTCCTGTCCTTTGTCCCTTG
GTGCCAGTGCTCTGAGAAGACATGCAGGTGCTGCCTCCTGTGAGTTGCAG
GAAACACTGCAGGCATGTCGGACGGTCGCACTGTACACTGACTTCAGCAG
TGGGTGACAAACCATGTCGTTTTGTCTTCTCCCGCACCTTAAGAAGAAAG
ATTTAAACCCCTGCCTTCTTGGCCCATCTGGTGAAATTCCCTAAAAATCC
CTGGAAAGGTCTTGAAGGGAAAAGTGGGGCCCGAG

GTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXAGCCATCAGCCCTTTGGTGGAGCCCTCCNANGTTCTCA
TTTGTGGCACGGCGCAGAGGGGAGGGGTGTGGAGAGCTGAGAGTGGAGTA
CTATTTACCTTCTTCTCTTTTCTTCTTCTTCTCCTCCCTCTCTCTCTTTT
CTTCTTTCCCCCTCCCCTTCCCTCTCCCCTCTCCTTCTCCCCTTTTTCCT
CCCTCCCCCCTTCTTTTCCCTCCTTTTTTTCTTTTCCTTCCCCCTCCTTT
TTTTTTCTTTTCCTTTCCCCCTCCTCCCCCTTCCTCCCCCCTCTTTTCTT
CTCCTTTCTCTCCTTTCTTTCCTCTCTTTTTTTTTTCTCTCCTTCCCCCC
CCCCCTTTTCCCTTTCCCCTTCCCCTTTTCTTTTCTTCCTCCCTTTCCTT
CTTTTCCTTCCCTCCCTCCTTCTCCCCCTTCCCCTTTTTTCCTTCTTCTG
CCTCTCCTTTTCTCCTCCTTCCTTTCCCTCCTTTTCCTTCTTCTTTCTTT
TTCTTCTCCTCTCCTTCCCTCCTTTCCTCTTTCTCCCTTTTCCTCCTTTC
CTTCCCTTCTCCTCTTTTCTTCCCTCCCCCTTCCTTTCCTTTCCTTTTCT
TTCCTTTCTTTCCCCCCTTTTTCCTTTTTCCCCCCTTTTCCTCCTTTCCC
TCCTTTTCCTCCCTTCCTCTTTCTCTCCCTTCCTCCCCTTTTCCTTTCTT
CTCTTTCTTTCCCTCCTTTTTCG

Query= MSMg01no358_n17.b1 MSMg01no358_n17.b1 CHROMAT_FILE:
MSMg01no358_n17.b1 PHD_FILE: MSMg01no358_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:13 2005
         (521 letters)



>mm_chr14_61936086_61937005
          Length = 920

 Score =  891 bits (461), Expect = 0.0
 Identities = 503/517 (97%), Gaps = 1/517 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccatgactgcctccctgagctcagccaaggaaggcgctcacaggcagtaatgggc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 205 gaattccatgactgcctccctgagctcagccaaggaaggcgctcacaggcagt-atgggc 263

                                                                       
Query: 65  tgacccgactcataaatgtggaagctcagagaaaaacacaaccactttagggggcagaga 124
           ||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 264 tgaacagactcataaatgtggaagctcagagaaaaacacaaccacttcagggggcagaga 323

                                                                       
Query: 125 gtattcctggttgtcttgattttcatcactctaacatattcaccgttgaggaacatgcgc 184
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 324 gtattcctgtttgtcttgattttcatcactctaacatattcaccgttgaggaacatgtgc 383

                                                                       
Query: 185 tccgaagcaacagactgtggagtttaaggctctccctgccagctgggcaggcagcagaga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tccgaagcaacagactgtggagtttaaggctctccctgccagctgggcaggcagcagaga 443

                                                                       
Query: 245 gtacgcatggccgtgaggacccaggtttgctgttctgcgctcacgttggcaggctctcac 304
           |||| ||||||||||||||||||||||||||||||||  ||||| ||||||||||| |||
Sbjct: 444 gtactcatggccgtgaggacccaggtttgctgttctgtactcacattggcaggctcccac 503

                                                                       
Query: 305 tcaccggtaactccagctccaaggatgctctcttctggcctctgcgggcaccaggcacac 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcaccggtaactccagctccaaggatgctctcttctggcctctgcgggcaccaggcacac 563

                                                                       
Query: 365 agatgatccatatacgtacatgcagacaaacactcatatacataaacaaaaataaacaca 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agatgatccatatacgtacatgcagacaaacactcatatacataaacaaaaataaacaca 623

                                                                       
Query: 425 tctgtaaaaagaaaaaagacctcctgtcctttgtcccttggtgccagtgctctgagaaga 484
           ||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tctataaaaagtaaaaagacctcctgtcctttgtcccttggtgccagtgctctgagaaga 683

                                                
Query: 485 catgcaggtgctgcctcctgtgagttgcaggaaacac 521
           |||||||||||||||||||||||| ||||||||||||
Sbjct: 684 catgcaggtgctgcctcctgtgagctgcaggaaacac 720


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 920
Length adjustment: 10
Effective length of query: 511
Effective length of database: 910
Effective search space:   465010
Effective search space used:   465010
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)