Query= MSMg01no359_l13.b1 MSMg01no359_l13.b1 CHROMAT_FILE:
MSMg01no359_l13.b1 PHD_FILE: MSMg01no359_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:16 2005
(437 letters)
>mm_chr14_23466319_23467155
Length = 837
Score = 808 bits (418), Expect = 0.0
Identities = 435/446 (97%), Gaps = 9/446 (2%)
Strand = Plus / Minus
Query: 1 cacttgacctcccataatgtgcttctcttaattacattaaagattttcaaatgtgggcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cacttgacctcccataatgtgcttctcttaattacattaaagattttcaaatgtgggcat 431
Query: 61 actggctttgacaggtgaagttttaatcaacttcaggtggctacatttaactgctccctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 actggctttgacaggtgaagttttaatcaacttcaggtggctacatttaactgctccctg 371
Query: 121 gactggagccgcaacattggctgcacccaggctatccaacgtggttctaatttaaatgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gactggagccgcaacattggctgcacccaggctatccaacgtggttctaatttaaatgac 311
Query: 181 taattttgacacgaggaaaagatgagcccccatgggaacccctacccacatcggtggggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 taattttgacacgaggaaaagatgagcccccatgggaacccctacccacatcggtggggg 251
Query: 241 agattttctaaattagaattaatgcagcaagctgaggcatggctagag---------ctg 291
|||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 250 agattttctaaattagaattaatgcagcaagctgaggcatggctagagcttcttcttctt 191
Query: 292 cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt 131
Query: 352 cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcatggggggggtggc 411
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 130 cttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcatggtgggggtggc 71
Query: 412 ccaaataaatagcattgatcctttgt 437
||||||||||||||||||||||||||
Sbjct: 70 ccaaataaatagcattgatcctttgt 45
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 212
Number of extensions: 58
Number of successful extensions: 57
Number of sequences better than 10.0: 1
Number of HSP's gapped: 52
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_l13.g1 MSMg01no359_l13.g1 CHROMAT_FILE:
MSMg01no359_l13.g1 PHD_FILE: MSMg01no359_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:16 2005
(348 letters)
>mm_chr14_23315818_23316565
Length = 748
Score = 634 bits (328), Expect = 0.0
Identities = 343/348 (98%)
Strand = Plus / Plus
Query: 1 tctgggcagctccctaaggtagcaagcctactgctacctggtgtgcacagagagggctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgggcagctccctaaggtagcaagcctactgctacctggtgtgcacagagagggctag 260
Query: 61 gttatgacttggtgtgtcttactttatagaagactagtcatcatgcaaggaagtcgggca 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttatgacttggtgtgccttactttatagaagactagtcatcatgcaaggaagtcgggca 320
Query: 121 agcatgttcagcctgacatagcatgggcagagtcagagctactagacttacttagctatg 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 agcatgttcagcctgacatagcatgggcaaagtcagagctactagacttacttagctatg 380
Query: 181 gtgactttgcccttggtaaatctgcttcggtgtgttggccctccacctaaaaccaagcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgactttgcccttggtaaatctgcttcggtgtgttggccctccacctaaaaccaagcac 440
Query: 241 atctgtacacacccttgcatgtaattcaaggggagtttgttggactccttaccaagtcaa 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atctgtacacccccttgcatgtaattcaaggggagtttgttggactccttaccaagtcaa 500
Query: 301 atactcaactaagtgattatgaaaggttattgtgcgacatgacatata 348
|||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 501 atactcaactaagtgattatgaaaggttattgtgtgagatgacatata 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
