Query= MSMg01no360_j16.b1 MSMg01no360_j16.b1 CHROMAT_FILE:
MSMg01no360_j16.b1 PHD_FILE: MSMg01no360_j16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:23 2005
(495 letters)
>mm_chr14_102114530_102115424
Length = 895
Score = 882 bits (456), Expect = 0.0
Identities = 482/494 (97%), Gaps = 7/494 (1%)
Strand = Plus / Plus
Query: 5 gaattcacctaagcttca----tagtctctcacaagtattcaggattgtagttcattcca 60
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcacctaagc---aaaaatagtctctcacaagtattcaggattgtagttcattcca 260
Query: 61 gatgtagccaactgggcaaccaagactagccatcacatatgggaagcaacaccaggatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatgtagccaactgggcaaccaagactagccatcacatatgggaagcaacaccaggatcc 320
Query: 121 agtcatgggggtgccatgctaaggattttagctctcatcaccacaaaggctgcacaacgg 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 321 agtcatgggggtgccatgctaaggattttaactctcatcaccacaaaggctgcacaacgg 380
Query: 181 tgcacatctcacagtatattccaatctcattttacgtcttgcaatggggttaaattccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcacatctcacagtatattccaatctcattttacgtcttgcaatggggttaaattccaa 440
Query: 241 cacacgatgccttggtcatggcaccgaaactatatccaaagctgggtgtccactaagtgg 300
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 441 cacacgatgccttggtcatggcaccgaaactatatccaaagcttggtgtcccctaagtgg 500
Query: 301 atatattatgggaaccgcttcattctagaacttatgaccttcataaacggaattctgctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atatattatgggaaccgcttcattctagaacttatgaccttcataaacggaattctgctg 560
Query: 361 ttctcagcacttcaccgatggcatacattgcagtaatgatgcaaaatgtgattctattaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctcagcacttcaccgatggcatacattgcagtaatgatgcaaaatgtgattctattaa 620
Query: 421 aagagagttttcagaaccttcaacaatggcctaaaatcactccattgtaaacagaactca 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 621 aagagagttttcagaaccttcaacaatggtctaaaatcactccattgtaaacagaactca 680
Query: 481 gactggtttctctc 494
||||||||| ||||
Sbjct: 681 gactggtttttctc 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no360_j16.g1 MSMg01no360_j16.g1 CHROMAT_FILE:
MSMg01no360_j16.g1 PHD_FILE: MSMg01no360_j16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:24 2005
(417 letters)
>mm_chr14_102317476_102318292
Length = 817
Score = 733 bits (379), Expect = 0.0
Identities = 392/399 (98%), Gaps = 5/399 (1%)
Strand = Plus / Minus
Query: 19 tacagaggtgagagtgtctaggaaaatggggtgtggtgtcctccgctaggttctccaaca 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 tacagaggtgagagtgtctaggaaaatggggtgtggtgtcctccgctaggttctccaaca 488
Query: 79 aggtatagagaagaataagaacaaggcgtgcgtcatggtacctcatccaggtacttggaa 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 aggtatagagaagaataagaacaaggcgtgcgtcatggtacctcatccaggtacttggaa 428
Query: 139 ttctctctctccgcctcctgttgggctctctgccactcctccctcagcttctcctgctca 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ttctctctctccgcctcctgttgggctctctgccactcctccctcagcttctcctgctca 368
Query: 199 cgctggtatttttcctgtgaggaaatagggcataaagattaatcaaggttgccttctcat 258
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 367 cgctggtatttttcctgtgaggaaatagggcataatgattaatcaaggttgccttctcat 308
Query: 259 gggaagcagaatattttccgttaacaattttgctgtctctaaaccttcatgtcactcttt 318
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gggaagcagaatattttccattaacaattttgctgtctctaaaccttcatgtcactcttt 248
Query: 319 catgtgaccaatcagagttttagtcctggaagaaagaggaaaaaaaaaaaaaaaaaaaaa 378
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 247 catgtgaccaatcagagttttagtcctggaagaaagagg-----aaaaaaaaaaaaaaaa 193
Query: 379 ggtcttgcattaagctaaaatacaggtgtcaagaaagag 417
|||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ggtcttgcattaagctaaaatacaggtgtcaagaaagag 154
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
