NNTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTGATTATATTATTATAGAATTTTATTACTATAAAAGATGCACT
TACTACAATGATTAGCTTTCAATCTAGAGCAAGAGCTTCAATGTATTTGA
GAAACTACCTAAATTATTATTTAATAGTTCCTAAAGCCTTACAATAATTT
TTAATATATTTTGTCTTCAAAAACCGCTAATAGCTTCCATCAGTTTAGTT
AGAGTTGGCATATACACTTTTTGCTTTAAACACTTTATTCATCAACCATA
TTGGTATGAGAAATTATAATTGACTAATAAATAAATGAAACTGACCTTTA
TTATACATAAAACTCAATGGTTGAAGAAATCATGACCAAGTAATCCAAGT
ATGAATGTGAATATTTCTCTTTCCTTATACGCTTAATAAAACTTATTATG
TTTTAGAGAGGAAATGACATAGCTAACCTAGTANAGAAATTGAACTAAGA
CATCTTTTGTCCTGAAATCCCACGAGCCAGCTGACAAAGAGGAGATATTT
AGCAATTTTTTTAAAGACCCCTAAGCCAAACATTTATCCACTAACCTGTG
GGACTATTAAGAGACAATGGAAACCGTCTTTTGAAACAAATATAAGAGAA
AATGTTGGAGTTGTTATTTTAAAGGGAAAATTGAAAATGGGGGTTTCCCC
CCCCAACCCTTGGGCCTCCTATTTTAATTCAAGGAAGAAATTTTCCTCCC
TCTTTGTCTCC

NCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGAAGGTCTGATAGAACTCTG
CACTAAACCTTTCTGGTACTGGGCTTTTTATGGTTGGGAGAGTATTAATG
ACTGTTTCTATTTCTTTAGGGCATATGGGACCCTATAGATTGTTTATCTG
ATCCTGATTTATCTTTGTGTATCTGGTATCTGTCTAGAAAATTGTCCATT
TCATCCAGGGTTTCCAGTTTTGTCGGGATAGACCTTTGTTGTAGGATCTG
ATCATTTTTTGGATTTCCTCATATTCTGTTGTTATATCTCCCTTTTTATT
TCTGATCTTAATTAGGATACTCTCCCTGTTAGTTAGCATCCTCTAGTTAG
TCTGGATAGGGGTTTATTTATCATGTTGATTTTCTCAAAAAAATATCTCC
TGGTGTTTTTTTTTTTTTTTTGCATAGTTCTTTTTGTTTCCACTTGGTAG
ATTTTAGGGCTGAGTTTGATCATTTCCTGCCATGTACTACTCTTGGGTGA
ATTTGCTTCTTTTTGTTCCACAGCTCTTCACTGTTCTGTTAAGATGCTTA
TATGTGTTCTCCCCTCACCCCTTTTTGAAGGCTCCCCAAGTTTTTGGGGT
TCCCCCTTTGTAATTCTTTTCTTGGGGCCCATATCTTTTTCCTATTGTTT
TGCCCTTTTTGCCTTTACTTTCTCACATTTTCATTTCTTTTTCTCTTTTT
CTTC

Query= MSMg01no360_l14.b1 MSMg01no360_l14.b1 CHROMAT_FILE:
MSMg01no360_l14.b1 PHD_FILE: MSMg01no360_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:33 2005
         (464 letters)



>mm_chr14_82077246_82078109
          Length = 864

 Score =  866 bits (448), Expect = 0.0
 Identities = 456/459 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgattatattattatagaattttattactataaaagatgcacttactacaatga 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gaattctgattatattattatagaattttattactataaaagatgcacttactacaatga 604

                                                                       
Query: 65  ttagctttcaatctagagcaagagcttcaatgtatttgagaaactacctaaattattatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ttagctttcaatctagagcaagagcttcaatgtatttgagaaactacctaaattattatt 544

                                                                       
Query: 125 taatagttcctaaagccttacaataatttttaatatattttgtcttcaaaaaccgctaat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 taatagttcctaaagccttacaataatttttaatatattttgtcttcaaaaaccgctaat 484

                                                                       
Query: 185 agcttccatcagtttagttagagttggcatatacactttttgctttaaacactttattca 244
           |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 483 agcttccatcagtttagttagagttggcatatacactttttgctttgaacagtttattca 424

                                                                       
Query: 245 tcaaccatattggtatgagaaattataattgactaataaataaatgaaactgacctttat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 tcaaccatattggtatgagaaattataattgactaataaataaatgaaactgacctttat 364

                                                                       
Query: 305 tatacataaaactcaatggttgaagaaatcatgaccaagtaatccaagtatgaatgtgaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tatacataaaactcaatggttgaagaaatcatgaccaagtaatccaagtatgaatgtgaa 304

                                                                       
Query: 365 tatttctctttccttatacgcttaataaaacttattatgttttagagaggaaatgacata 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tatttctctttccttatacgcttaataaaacttattatgttttagagaggaaatgacata 244

                                                  
Query: 425 gctaacctagtanagaaattgaactaagacatcttttgt 463
           |||||||||||| ||||||||||||||||||||||||||
Sbjct: 243 gctaacctagtaaagaaattgaactaagacatcttttgt 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space:   387716
Effective search space used:   387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)