Query= MSMg01no361_a13.b1 MSMg01no361_a13.b1 CHROMAT_FILE:
MSMg01no361_a13.b1 PHD_FILE: MSMg01no361_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:56 2005
(601 letters)
>mm_chr14_121870094_121871092
Length = 999
Score = 745 bits (385), Expect = 0.0
Identities = 395/399 (98%), Gaps = 3/399 (0%)
Strand = Plus / Plus
Query: 5 gaattctatagcttatttttccgcaccagttgataataaacatgatgtggactttcttct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatagcttatttttccgcaccagttgataataaacatgatgtggactttcttct 264
Query: 65 ctaagttatgaattacgttggttgtgtattcttggtacactcttgacactttcacaccct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctaagttatgaattacgttggttgtgtattcttggtacactcttgacactttcacaccct 324
Query: 125 ggtcaccactgggcttggttaaaggaatgcgttaagctcggttagatgcgaggagagcca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggtcaccactgggcttggttaaaggaatgcgttaagctcggttagatgcgaggagagcca 384
Query: 185 gtttcaagagaaatctccgtacctgattccgttctcccctttctctggcttttggttaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtttcaagagaaatctccgtacctgattccgttctcccctttctctggcttttggttaag 444
Query: 245 accatcttttacctgagagagagagagaagaaagaatgtaagaatgtttctaagccagag 304
|||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 445 accatcttttacctgagagagagaga--agaaagaatataagaatgtttctaagccagag 502
Query: 305 agatggctcagtgtgtgaggcacctactgtgtaagcctgaccctttgagtttaatccttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agatggctcagtgtgtgaggcacctactgtgtaagcctgaccctttgagtttaatccttg 562
Query: 365 acaagatgggaggggagactccacttcacacagnttttt 403
||||||||||||||||||||||||||||||||| |||||
Sbjct: 563 acaagatgggaggggagactccacttcacacag-ttttt 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 999
Length adjustment: 10
Effective length of query: 591
Effective length of database: 989
Effective search space: 584499
Effective search space used: 584499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_a13.g1 MSMg01no361_a13.g1 CHROMAT_FILE:
MSMg01no361_a13.g1 PHD_FILE: MSMg01no361_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:55:57 2005
(471 letters)
>mm_chr14_122076022_122076891
Length = 870
Score = 857 bits (443), Expect = 0.0
Identities = 464/471 (98%), Gaps = 1/471 (0%)
Strand = Plus / Minus
Query: 1 tttgggcctttttcttgttccaagtttgttcatctccttaataacaggtgaattaaacat 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 tttgggcctttttcttgtcccaagtttgttcatctccttaataacaggtgaattaaacat 611
Query: 61 ggagactgggggcatgtgcatgagtgtactcgagcatgcgtgcgcacacatgcctgtatg 120
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 610 ggagactgggggcatgtgcatgagtgtactcaagcatgggtgcgcacacatgcctgtatg 551
Query: 121 ttgggtcagcttctctatgcatggcattgtcaaaaatgaacagaaaatgggagttaatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 ttgggtcagcttctctatgcatggcattgtcaaaaatgaacagaaaatgggagttaatgg 491
Query: 181 ccggtagcggagctttgaggtgtggtgtgggaatgccccacactatttgagtttctagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ccggtagcggagctttgaggtgtggtgtgggaatgccccacactatttgagtttctagtc 431
Query: 241 tagcttggtgctggagcctctcgtgagcaactcctgtgctctgagacaaatgcctcctcc 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 430 tagcttggtgctggagcctctcatgagcaactcctgtgctctgagacaaatgcctcctcc 371
Query: 301 agatccttggaaagatgccgtaccctgtgcgcagtcggttggctgcagcagttcccagtg 360
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 370 agatccttggaaagatgccgtgccctgtgcacagtcggttggctgcagcagttcccagtg 311
Query: 361 tcctctgctgctatggtttcagtgttgcactgtatccaaaaaaacgcccaatgtacagag 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 310 tcctctgctgctatggtttcagtgttgcactgtatcc-aaaaaacgcccaatgtacagag 252
Query: 421 agatccagccacgtggcatttctaagcagacgtcaaagggagagatgctgt 471
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 agatccagccacgtggcatttctaagcagacgtcaaagggagagatgctgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 870
Length adjustment: 10
Effective length of query: 461
Effective length of database: 860
Effective search space: 396460
Effective search space used: 396460
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
