Query= MSMg01no363_b05.b1 MSMg01no363_b05.b1 CHROMAT_FILE:
MSMg01no363_b05.b1 PHD_FILE: MSMg01no363_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:40 2005
(555 letters)
>mm_chr14_122070538_122071492
Length = 955
Score = 774 bits (400), Expect = 0.0
Identities = 421/436 (96%), Gaps = 13/436 (2%)
Strand = Plus / Minus
Query: 5 gaattcagttggagttcagtttgtgctgcttgcatctgcgtggattgtaggactagtcac 64
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 423 gaattcagttggagttcagtttgtgctgcttgcatctgcatggattgtaggactagtcac 364
Query: 65 tgaagtatgatcaccaaccggggcctacacccctaaggaaatctgattaacccagggcct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgaagtatgatcaccaaccggggcctacacccctaaggaaatctgattaacccagggcct 304
Query: 125 ctggcaacaatcagctctcagcagctcttcagctagagatggagctatgagtccttctgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ctggcaacaatcagctctcagcagctcttcagctagagatggagctatgagtccttctgc 244
Query: 185 ttccatgctagaatgccagctggtttggtcttgtgtggactgtaagttcatgagggcact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ttccatgctagaatgccagctggtttggtcttgtgtggactgtaagttcatgagggcact 184
Query: 245 gatcctgtcaggccctgaagatacttctcctttagtcagtcctccccgacctctggctcg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gatcctgtcaggccctgaagatacttctcctttagtcagtcctccccgacctctggctcg 124
Query: 305 atcagcctttctgctccctcctcctgctccctcctccaatgtcatccttgaatctttggg 364
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 123 atcagccttt-------------ctgctccctcctccaatgtcatccttgaatctttggg 77
Query: 365 tgggtgtagtgtacatgccccatttgtggctgacagtgttcatggccgcttgtgcggctg 424
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 tgggtgtagtgtacataccccatttgtggctgacagtgttcatggccgcttgtgcggctg 17
Query: 425 gtgtgtgtcatagacc 440
||||||||||||||||
Sbjct: 16 gtgtgtgtcatagacc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_b05.g1 MSMg01no363_b05.g1 CHROMAT_FILE:
MSMg01no363_b05.g1 PHD_FILE: MSMg01no363_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:40 2005
(429 letters)
>mm_chr14_121925031_121925861
Length = 831
Score = 571 bits (295), Expect = e-167
Identities = 320/329 (97%), Gaps = 2/329 (0%)
Strand = Plus / Plus
Query: 103 agtgtggaaaaacgatggcttgactcaggcagagaagccacactcatccatgggcatggg 162
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 303 agtgtggaaaaacgatggcttgactcaggcagagaagccacactcatccatgtgcatggg 362
Query: 163 tctcaacaggcttcaacattttcccaggggagaagcatcttcaagtctctgtcccacaga 222
||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 363 tctcaacagacttcaacattttcccaggggagaaacatctccaagtctctgtcccacaga 422
Query: 223 ggtcacctgtgcatcagtcaggtgtcatgacaacaccagcattgacactgtcacacaaat 282
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ggtcacctgtgtatcagtcaggtgtcatgacaacaccagcattgacactgtcacacaaat 482
Query: 283 agcccatgggactatagtcatgtccctcttatggatggacacaaagatgggactttgtgc 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 agcccatgggactatagtcatgtccctcttatggatggacacaaagatgggactttgtgc 542
Query: 343 actcaaatctgaccagctttactgaagtgaaattacagagaga--gggttttctttgatg 400
||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||
Sbjct: 543 actcaaatctgaccagctttactgaagtgaaattacagagagaaagggtttcctatgatg 602
Query: 401 agtgttagaaatgattggtctgggcttcc 429
|||||||||||||||||||||||||||||
Sbjct: 603 agtgttagaaatgattggtctgggcttcc 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 831
Length adjustment: 9
Effective length of query: 420
Effective length of database: 822
Effective search space: 345240
Effective search space used: 345240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
