MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-364A18
Chromosome	14 (Build37)
Map Location	60,428,876 - 60,429,098
singlet/doublet	singlet
Overlap gene	Atp8a2
Upstream gene	EG668177, EG668182, 1700129C05Rik, EG380907, Rcbtb1, EG628693, Phf11, EG236451, D14Ertd668e, EG628705, Setdb2, Cab39l, Cdadc1, Tmem46
Downstream gene	LOC668162, LOC628768, Nupl1, Mtmr6, 2600011E07Rik, Ppia-ps14_696.1, EG628836, Spata13, C1qtnf9, Mipep
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG668177 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668177 MGI:3643783
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 21 Proteins pseudo : _no_value

name	EG668182 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668182 MGI:3646682
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 725 ESTs, 11 Proteins

name	1700129C05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67932 MGI:1915182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG380907 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:380907 MGI:3647352
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rcbtb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71330 MGI:1918580
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG628693 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628693 MGI:3644962
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins

name	Phf11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:219131 MGI:1918441
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG236451 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236451 MGI:3645789
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 3 Proteins

name	D14Ertd668e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:219132 MGI:1277133
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG628705 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628705 MGI:3648476
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins

name	Setdb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239122 MGI:2685139
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cab39l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69008 MGI:1914081
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdadc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71891 MGI:1919141
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem46 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:219134 MGI:2444716
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp8a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50769 MGI:1354710
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668162 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668162
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 506 ESTs, 8 Proteins pseudo : _no_value

name	LOC628768 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:628768
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 ESTs, 8 Proteins pseudo : _no_value

name	Nupl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71844 MGI:1919094
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mtmr6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:219135 MGI:2145637
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2600011E07Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72125 MGI:1919375
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppia-ps14_696.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606535
definition	note : peptidylprolyl isomerase A pseudogene 14_696.1 pseudo : _no_value

name	EG628836 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628836 MGI:3647124
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Spata13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:219140 MGI:104838
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 202 ESTs, 4 Proteins

name	C1qtnf9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239126 MGI:3045252
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mipep (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70478 MGI:1917728
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668182 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265765 GeneID:668182 MGI:3646682
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 725 ESTs, 11 Proteins product : predicted gene, EG668182 transcript_id : XM_994790.2

name	EG380907 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363123 GeneID:380907 MGI:3647352
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG380907 transcript_id : NM_001004158.2

name	Rcbtb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037240 GeneID:71330 MGI:1918580
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 transcript_id : NM_027764.1

name	EG628693 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265766 GeneID:628693 MGI:3644962
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 6 Proteins product : predicted gene, EG628693 transcript_id : XM_893456.3

name	Phf11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351633 GeneID:219131 MGI:1918441
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PHD finger protein 11 transcript_id : NM_172603.2

name	EG236451 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265767 GeneID:236451 MGI:3645789
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 3 Proteins product : predicted gene, EG236451, transcript variant 1 transcript_id : XM_135671.8

name	D14Ertd668e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362087 GeneID:219132 MGI:1277133
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 14, ERATO Doi 668, expressed transcript_id : NM_199015.2

name	EG628705 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149265629 GeneID:628705 MGI:3648476
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 3 Proteins product : predicted gene, EG628705 transcript_id : XM_893468.3

name	Setdb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486619 GeneID:239122 MGI:2685139
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SET domain, bifurcated 2 transcript_id : NM_001081024.1

name	Cab39l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378328 GeneID:69008 MGI:1914081
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calcium binding protein 39-like transcript_id : NM_026908.3

name	Cdadc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801958 GeneID:71891 MGI:1919141
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytidine and dCMP deaminase domain containing 1 transcript_id : NM_027986.2

name	Tmem46 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803556 GeneID:219134 MGI:2444716
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 46 transcript_id : NM_145463.4

name	Atp8a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131094 GeneID:50769 MGI:1354710
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 transcript_id : NM_015803.2

name	Nupl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24497430 GeneID:71844 MGI:1919094
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleoporin like 1 transcript_id : NM_170591.1

name	Mtmr6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130049 GeneID:219135 MGI:2145637
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myotubularin related protein 6 transcript_id : NM_144843.3

name	2600011E07Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367430 GeneID:72125 MGI:1919375
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2600011E07 gene transcript_id : NM_028113.2

name	Spata13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94397196 GeneID:219140 MGI:104838
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 202 ESTs, 4 Proteins product : spermatogenesis associated 13, transcript variant 7 transcript_id : XM_901902.2

name	C1qtnf9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892199 GeneID:239126 MGI:3045252
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C1q and tumor necrosis factor related protein 9 transcript_id : NM_183175.3

name	Mipep (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377084 GeneID:70478 MGI:1917728
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial intermediate peptidase transcript_id : NM_027436.2

name	EG668182 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94397192 GeneID:668182 MGI:3646682
definition	codon_start : 1 product : hypothetical protein protein_id : XP_999884.1

name	EG380907 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51921319 CCDS:CCDS27167.1 GeneID:380907 MGI:3647352
definition	codon_start : 1 product : hypothetical protein LOC380907 protein_id : NP_001004158.1

name	Rcbtb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037241 CCDS:CCDS27168.1 GeneID:71330 MGI:1918580
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0016568 - chromatin modification [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1 protein_id : NP_082040.1

name	EG628693 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94397194 GeneID:628693 MGI:3644962
definition	codon_start : 1 product : hypothetical protein protein_id : XP_898549.2

name	Phf11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369858 CCDS:CCDS27169.1 GeneID:219131 MGI:1918441
definition	GO_function : GO:0008800 - beta-lactamase activity [Evidence IEA] GO_process : GO:0030655 - beta-lactam antibiotic catabolism [Evidence IEA]; GO:0046677 - response to antibiotic [Evidence IEA] codon_start : 1 product : PHD finger protein 11 protein_id : NP_766191.1

name	EG236451 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51768467 GeneID:236451 MGI:3645789
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_135671.3

name	D14Ertd668e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39841029 CCDS:CCDS27170.1 GeneID:219132 MGI:1277133
definition	GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC219132 protein_id : NP_950180.1

name	EG628705 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149265630 GeneID:628705 MGI:3648476
definition	codon_start : 1 product : hypothetical protein protein_id : XP_898561.2

name	Setdb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486620 GeneID:239122 MGI:2685139
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0018024 - histone-lysine N-methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA] codon_start : 1 product : SET domain, bifurcated 2 protein_id : NP_001074493.1

name	Cab39l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541826 CCDS:CCDS27171.1 GeneID:69008 MGI:1914081
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : calcium binding protein 39-like protein_id : NP_081184.3

name	Cdadc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625890 GeneID:71891 MGI:1919141
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA] codon_start : 1 product : cytidine and dCMP deaminase domain containing 1 protein_id : NP_082262.1

name	Tmem46 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21703918 CCDS:CCDS27173.1 GeneID:219134 MGI:2444716
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : transmembrane protein 46 protein_id : NP_663438.1

name	Atp8a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7656912 CCDS:CCDS27174.1 GeneID:50769 MGI:1354710
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0015662 - ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0016820 - hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004012 - phospholipid-translocating ATPase activity [Evidence IEA] GO_process : GO:0006812 - cation transport [Evidence IEA] codon_start : 1 note : ATPase, class 1, member a; ATPase 8A2, p type; ATPase 8A2, class I product : ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 protein_id : NP_056618.1

name	Nupl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24497431 CCDS:CCDS27175.1 GeneID:71844 MGI:1919094
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0015288 - porin activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 product : nucleoporin like 1 protein_id : NP_733479.1

name	Mtmr6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450239 CCDS:CCDS27176.1 GeneID:219135 MGI:2145637
definition	GO_function : GO:0004437 - inositol or phosphatidylinositol phosphatase activity [Evidence IEA] GO_process : GO:0046839 - phospholipid dephosphorylation [Evidence IEA] codon_start : 1 product : myotubularin related protein 6 protein_id : NP_659092.1

name	2600011E07Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037287 CCDS:CCDS27177.1 GeneID:72125 MGI:1919375
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : hypothetical protein LOC72125 protein_id : NP_082389.1

name	Spata13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94397197 GeneID:219140 MGI:104838
definition	codon_start : 1 product : spermatogenesis associated 13 isoform 7 protein_id : XP_906995.2

name	C1qtnf9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63999399 CCDS:CCDS27178.1 GeneID:239126 MGI:3045252
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_process : GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 product : C1q and tumor necrosis factor related protein 9 protein_id : NP_898998.2

name	Mipep (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28076953 GeneID:70478 MGI:1917728
definition	GO_function : GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : mitochondrial intermediate peptidase protein_id : NP_081712.1

name	EG628836 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628836
definition	number : 2 pseudo : _no_value

name	EG628836 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628836
definition	number : 1 pseudo : _no_value

name	EG668177 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94397190 GeneID:668177 MGI:3643783
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 21 Proteins product : predicted gene, EG668177 pseudo : _no_value transcript_id : XR_002153.1

name	1700129C05Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149265367 GeneID:67932 MGI:1915182
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700129C05 gene transcript_id : XR_035476.1

name	LOC668162 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265768 GeneID:668162
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 506 ESTs, 8 Proteins product : similar to ribosomal protein S2 pseudo : _no_value transcript_id : XR_034652.1

name	LOC628768 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265769 GeneID:628768
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 ESTs, 8 Proteins product : similar to suppressor of initiator codon mutations, related sequence 1 pseudo : _no_value transcript_id : XR_034656.1

clone name	MSMg01-148A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316M08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-540L05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-116I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-495O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-339F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-488P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-315L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083K04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-087K15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-232D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-351L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112D21
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-364A18.T7 (MSMg01no364_a18.b1)	MSMg01-364A18.TJ (MSMg01no364_a18.g1)
ACC	AG472338	AG472339
length	791	811
length of high quality (start - end)	224 (299 - 522)	---
definition	CHROMAT_FILE: MSMg01no364_a18.b1 PHD_FILE: MSMg01no364_a18.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:00:00 2005	CHROMAT_FILE: MSMg01no364_a18.g1 PHD_FILE: MSMg01no364_a18.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 23:00:00 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TATATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCGAGGATCC GCGGAATTCTTGGCACAATAGACTGTAATCGCTCTAAATTGTATCATGGA CTACGCAAAATAATTTTTATAGCTCAAGGCTTCATGTCCTCCATCCCCAT CCCTTGCTGGCATTGCTACTACACCAAAGGCTCTGAACACTCATAGGCAA ACAAAGAGCCTTTCATCAGAAAGTCACTGGATAGGATCTGCTATCGTTCA TTAACGACGCAGCTGTGTTCCACCTCCCATTGCTGGAGCAGTGTCAGGTG TTTGTTATGCAAGGGGTAGCAGAAATGTGTGTAAAAATCATTTCATTTAT GGGCAGGACCTATGGCAAGTATTTGAGAACGATAGTTTTATAACCAATAA AACAATGCTCTTAAGTTATTGACAGTAAGATTTAGTGCTTGGCTCCACAG AACAGGATGGTCAGAGGAGCCCAGAACTCAGGCGTTCTACGGCATCTCCA TCAGTCCCTTGTCCCTCTGAGCTACCCTTGGATGAGGGGTGGACTCTGTG CTTTTGTTTTGGACGTCAAGAAAAGTGTTCCTGCTTATCCTTTTAATTGC TGCGACACACACTCTTTCCCTGGCACTCTCTTTCACGCACTCCTTTTTAC CTCTTCTTTTCTCTCTCTTCCTCTTTTTCTTCTATTATTTTCTTATACTA ATCCTTTACTTATTATGTTTCTATTATTCTCTTCTTCTTCCTTTTATTAC TCTTACTTCTTTTACTCTTTTCTTCTTTCTTTCCCTTTTTT	NTTCCGATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGTGTCTTGCCTTGGTAGAGA ATTTCACGAATACAGTCGACCACTGCTCTGACTATAACACACGAGCTGCT CTATCCTTTGACTGGCTGCAAGAGTAGGGAGTCATTGGGAGCACTGACCA TTTCACTGATGCCGAATCCCTTCTGGTAGCCACCATATTGACTGCAGATG CGATATGTCGGATTTGCTGCGGCTGCTGCTGCTGCGACTTCCAGCATTCC CCATCAAGGAGACCCGGCCTTGACAGCAGAGCTAACGTGAGGTGCTATTT TTGAGACTAGACGCTGTCATATGGAAGAATCAACACTACACCCCGTAGCT ACTCAGCAAAGATGGTCCCAAGAGTTAACTTACCCCCCATCACTTGTCGT AACGACACTGGGTGTCAGAACCTGGTCTTCCTGTAGAAATATAATGTGGG GAAATGGTATAACCATAAAACCGGAACTTGTATTTTTTGTTTTACCCCCC ATGTCCTGGCTACAAGTCCTTTATATCCTTTTGATTCATGATCTTTTTCC CTTTGTCCCCACGCCGCTAATTATGCCCTCCTCATTCCTCCTCTAATCTT TTACTTTTCCCTTCTCTTTCTAGTAATCATACCTCCCCATTTTCTTGCTC CTCTCCTTTTTCTTTTAATATTCTCTTTTCTTTCCTCTCCATCTCTTCTA TACTTAATCTCTTATTACTCTTTTATTTTCTTCCCCTTCCTCTTTCCTCA TNCCTTACACT
quality values	Open. Hide. 9 9 9 9 9 8 8 8 8 8 8 14 25 24 24 24 27 27 29 32 39 30 26 25 30 25 30 34 33 22 19 19 19 19 25 24 21 12 8 8 8 9 9 9 12 12 11 14 19 23 59 39 42 30 28 29 29 33 33 29 29 17 17 18 17 13 11 9 10 6 6 6 8 8 6 8 8 8 10 11 19 31 30 32 24 21 20 19 19 27 27 23 19 17 19 11 11 11 18 18 24 21 21 12 12 12 12 19 15 12 12 12 15 15 20 24 28 32 24 24 20 20 20 17 22 30 29 39 24 24 11 16 16 12 11 11 15 24 20 23 23 28 28 22 19 13 12 11 11 23 21 15 17 15 19 13 12 15 12 11 18 11 23 19 32 20 18 15 12 12 10 10 10 10 10 14 14 15 14 22 23 21 12 12 8 8 8 8 8 8 9 15 21 16 15 10 11 11 12 13 11 12 12 12 12 18 19 26 28 28 24 23 23 18 16 16 12 12 11 18 15 11 11 11 11 11 15 15 14 15 15 15 34 14 11 11 13 14 21 25 24 24 12 12 11 11 11 11 11 11 11 13 10 10 10 10 10 11 18 18 24 18 18 11 11 11 12 12 17 27 26 17 17 22 34 33 33 31 29 38 28 18 15 12 11 11 11 11 11 21 27 27 15 13 11 12 12 12 12 14 38 38 44 33 33 33 43 43 43 43 43 43 44 27 24 19 24 16 15 15 32 38 44 43 43 43 43 43 43 28 28 28 28 27 36 44 47 48 54 57 57 47 47 47 57 57 57 59 59 59 44 40 28 28 36 33 57 44 57 57 57 59 47 35 35 35 37 41 37 44 43 43 43 44 43 43 43 34 34 23 30 30 32 32 23 23 23 32 34 43 43 43 40 39 39 39 47 47 48 57 57 48 48 48 48 46 46 47 47 59 59 41 34 31 35 36 37 39 41 41 37 34 20 20 11 11 11 12 11 11 21 23 25 23 25 28 34 34 43 41 32 32 41 34 34 28 28 28 28 28 34 34 37 35 25 32 33 33 25 36 32 34 33 28 28 33 34 30 30 25 31 34 30 30 32 32 32 25 22 12 12 14 28 32 41 39 40 40 40 37 37 37 21 21 13 16 19 34 32 35 22 25 15 20 24 32 31 30 30 30 25 25 22 26 31 37 36 28 28 14 14 14 19 19 19 19 19 19 21 15 17 25 25 26 10 8 8 8 10 12 8 8 10 10 10 12 9 8 8 7 7 7 8 9 10 10 10 12 17 18 6 6 6 6 8 8 8 8 8 10 8 8 13 6 6 6 6 10 12 10 9 9 9 9 9 7 7 6 8 8 10 11 11 10 8 8 8 8 8 8 8 8 8 10 8 8 8 8 10 10 10 8 8 10 10 15 16 11 10 10 9 9 9 9 10 8 8 8 8 9 8 9 8 8 8 9 9 9 8 8 8 8 8 8 20 14 14 19 9 9 9 9 10 10 10 12 12 12 12 10 10 10 10 8 8 6 6 8 6 8 8 10 10 10 8 8 10 8 8 8 10 10 10 9 9 8 8 8 8 8 8 8 9 8 8 8 8 8 8 8 6 6 8 8 8 8 8 8 8 13 8 8 8 8 6 6 6 9 10 12 15 8 8 8 8 8 8 8 10 22 13 13 12 10 10 9 8 8 8 8 8 8 15 10 9 10 8 8 8 10 10 10 12 8 6 6 6 8 8 13 10 8 8 8 8 8 8 8 8 8 10 9 9 8 8 8 8 8 9 8 10 10 10 10 10 19 18 10 15 11 11	Open. Hide. 0 3 6 6 7 7 8 10 9 9 9 6 7 7 9 9 12 15 27 26 31 27 37 28 28 32 28 27 27 25 37 34 32 39 27 16 12 10 12 12 11 10 12 15 15 27 23 37 37 32 32 28 30 30 28 28 33 37 48 50 50 50 57 39 27 24 23 23 30 30 32 32 40 28 42 33 22 24 15 10 8 8 8 8 17 25 22 15 12 12 12 23 16 15 14 12 15 12 9 9 12 12 13 15 13 10 10 10 10 10 10 10 10 10 10 11 11 10 9 9 9 9 8 24 19 10 10 10 15 15 13 15 12 11 11 12 12 12 13 13 13 11 10 10 10 10 10 23 21 18 14 12 11 11 12 12 18 18 24 18 14 14 14 28 24 33 28 34 19 27 12 11 11 11 11 11 11 15 15 21 21 17 15 11 11 12 16 11 11 11 12 15 15 15 23 15 12 11 13 21 12 12 12 34 34 19 19 19 15 15 15 15 15 15 12 9 10 10 10 19 28 28 18 18 12 15 11 11 11 12 12 25 13 14 14 23 28 28 31 22 22 18 18 11 17 15 11 11 15 15 10 12 11 12 12 18 12 19 13 18 18 34 20 20 23 31 27 25 19 10 10 10 21 23 40 29 27 19 15 15 12 12 12 15 21 14 14 14 15 24 28 32 32 25 25 17 25 25 29 19 15 13 12 23 18 18 18 18 20 19 23 24 28 30 30 33 24 24 16 18 21 23 21 22 19 19 16 14 14 14 14 14 18 11 10 10 9 9 10 15 19 22 19 19 11 10 13 19 22 23 32 23 10 10 10 8 8 10 10 8 8 8 8 8 8 8 10 10 10 10 10 13 9 8 10 8 8 9 12 15 10 10 10 10 10 9 10 10 10 15 11 18 21 24 17 15 15 15 15 17 19 20 28 18 16 12 12 12 12 15 11 10 10 11 11 13 15 24 15 10 9 9 9 9 9 9 13 10 10 12 12 12 12 15 15 15 13 10 11 11 17 19 27 11 8 10 8 8 6 6 8 8 9 9 8 8 8 6 8 8 8 7 7 8 10 11 8 8 8 8 10 8 10 10 9 9 9 11 9 9 9 9 9 9 9 10 12 10 8 8 8 8 8 10 10 13 13 12 12 12 12 9 9 9 8 8 8 9 9 10 11 12 13 8 10 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 12 12 21 24 19 16 16 10 10 10 11 11 10 11 11 12 12 10 8 8 8 8 8 8 8 8 8 6 6 6 8 8 8 8 8 8 8 8 10 10 10 8 8 8 12 8 8 10 8 8 8 8 6 6 8 6 6 8 8 6 6 8 13 10 8 8 8 8 9 9 8 8 6 6 8 8 8 6 6 8 6 8 8 10 8 8 8 9 8 10 13 11 15 10 11 8 8 8 8 8 6 6 6 6 8 8 9 9 8 10 8 8 8 8 9 10 9 8 8 8 8 8 10 10 10 8 12 10 13 8 8 12 20 12 9 8 8 8 8 6 8 10 8 8 8 8 8 8 8 10 8 8 8 8 8 8 10 8 8 11 8 8 7 7 7 8 16 8 8 6 6 8 8 12 14 14 10 10 10 11 11 10 7 6 8 8 8 10 10 8 8 8 10 11 16 10 10 10 14 8 8 8 6 8 8 8 8 8 6 7 8 6 8 11 12 9 9 9 9 8 8 6 6 8 8 8 8 6 6 8 6 8 8 8 8 10 10 8 8 6 7 7 10 8 13 15 12 10 9 9 8 13 13 14 13 15 8 9 12 10 9 9 9 8 12 7 7 3 0 3 11 12 12 10 10 10 10 10

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no364_a18.b1 MSMg01no364_a18.b1 CHROMAT_FILE:
MSMg01no364_a18.b1 PHD_FILE: MSMg01no364_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:00 2005
         (224 letters)



>mm_chr14_60428675_60429298
          Length = 624

 Score =  408 bits (211), Expect = e-118
 Identities = 220/223 (98%)
 Strand = Plus / Plus

                                                                       
Query: 2   gtttgttatgcaaggggtagcagaaatgtgtgtaaaaatcatttcatttatgggcaggac 61
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gtttgttatgcaaggggtagcagaaatgtgtgtaaaaatcatttcatttatgggcaggac 261

                                                                       
Query: 62  ctatggcaagtatttgagaacgatagttttataaccaataaaacaatgctcttaagttat 121
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctatggcaagtatttgagaacgagagttttataaccaataaaacaatgctcttaagttat 321

                                                                       
Query: 122 tgacagtaagatttagtgcttggctccacagaacaggatggtcagaggagcccagaactc 181
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 322 tgacagtaagatttagtgcttggctccacagagcaggatggtcagaggagcccagaactc 381

                                                      
Query: 182 aggcgttctacggcatctccatcagtcccttgtccctctgagc 224
           ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aggtgttctacggcatctccatcagtcccttgtccctctgagc 424


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 624
Length adjustment: 9
Effective length of query: 215
Effective length of database: 615
Effective search space:   132225
Effective search space used:   132225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information