Query= MSMg01no365_l13.b1 MSMg01no365_l13.b1 CHROMAT_FILE:
MSMg01no365_l13.b1 PHD_FILE: MSMg01no365_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:18 2005
(481 letters)
>mm_chr14_56610466_56611346
Length = 881
Score = 884 bits (457), Expect = 0.0
Identities = 476/483 (98%), Gaps = 2/483 (0%)
Strand = Plus / Minus
Query: 1 atttccaacagagagtagctgatgagattaggatgataaattctttgctcagtggttgag 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 682 atttccaacagagagtagctgataagattaggatgataaattctttgctcagtggttgag 623
Query: 61 tcatctgatgattttaaactaagattgtcttg--gttttccatctggagcaactcagatg 118
|||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 622 tcatctgatgattttaaactaagattgtcttggtgttttccatctggggcaactcagatg 563
Query: 119 ggccagagggaaagaatttagccagggcagaattcgaccagactttggaatgggagattg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ggccagagggaaagaatttagccagggcagaattcgaccagactttggaatgggagattg 503
Query: 179 gtcaaaggacacatcgcatcagagcatgggttggtgagagcacccacagctagccacggg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gtcaaaggacacatcgcatcagagcatgggttggtgagagcacccacagctagccacggg 443
Query: 239 aaccagggaattgtcatcagctttgcagtaagctagccgtggaaattactgaagcaagca 298
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaccagggaagtgccatcagctttgcagtaagctagccgtggaaattactgaagcaagca 383
Query: 299 attactgaggcaagactgaagttgccgatgcttagccagtttagcgtggattgttttatt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 attactgaggcaagactgaagttgccgatgcttagccagtttagcgtggattgttttatt 323
Query: 359 aactacatgctacatagtattattccgttgtgtaaaagaatgcattttctgatccattct 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aactacatgctacatagtattattccgttgtgtaaaagaatgcattttctgatccattct 263
Query: 419 tctgttgtggatcatatgggtcgttatcagcatctggctatcacagataaggcatctgca 478
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tctgttgtggatcatatgggttgttatcagcatctggctatcacagataaggcatctgca 203
Query: 479 aac 481
|||
Sbjct: 202 aac 200
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_l13.g1 MSMg01no365_l13.g1 CHROMAT_FILE:
MSMg01no365_l13.g1 PHD_FILE: MSMg01no365_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:18 2005
(237 letters)
>mm_chr14_56405591_56406227
Length = 637
Score = 458 bits (237), Expect = e-133
Identities = 237/237 (100%)
Strand = Plus / Plus
Query: 1 atgaaatgaggggacagcccattctatcgcggacaggagcagggagagtcatccaagtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgaaatgaggggacagcccattctatcgcggacaggagcagggagagtcatccaagtga 260
Query: 61 gaggtgaggtgggaagagggcagtgtgttagtgggtcagggtaaaagggagggctccagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaggtgaggtgggaagagggcagtgtgttagtgggtcagggtaaaagggagggctccagg 320
Query: 121 ggggtttaggtgctttcgggtactccatttggagtcttacactcagcttctctgccagcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggggtttaggtgctttcgggtactccatttggagtcttacactcagcttctctgccagcc 380
Query: 181 agcactgcccacacgaggatcccaaagctgtacagacacaaatggaggcttagatgg 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcactgcccacacgaggatcccaaagctgtacagacacaaatggaggcttagatgg 437
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
