Query= MSMg01no366_c08.b1 MSMg01no366_c08.b1 CHROMAT_FILE:
MSMg01no366_c08.b1 PHD_FILE: MSMg01no366_c08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:54 2005
(445 letters)
>mm_chr14_78495174_78496018
Length = 845
Score = 814 bits (421), Expect = 0.0
Identities = 439/445 (98%)
Strand = Plus / Minus
Query: 1 gggagacatgacatgggtttctggggaaaacagctagttgtcattgtctcatcccctctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gggagacatgacatgggtttctggggaaaacagctagttgtcattgtctcatcccctctg 586
Query: 61 acatgtgctttatctatgttggtggcagcaccagcagtagggacaacagcggttgtggcc 120
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 585 acgtgtgctttatctatgttggtggcagcaccagcagtaaggacaacagcggttgtggcc 526
Query: 121 gcagtcatatcagccattagggcaagaacattgaagcaagcatatggggtgactgtagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gcagtcatatcagccattagggcaagaacattgaagcaagcatatggggtgactgtagaa 466
Query: 181 gtctggatcaagtcatgctttctttgtattgaaggtagttgagtgtaataacttagtaat 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gtctgtatcaagtcatgctttctttgtattgaaggtagttgagtgtaataacttagtaat 406
Query: 241 gactatgtttttgttaggacaacccaatcttgccttgttttatcccagctacgactagta 300
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gactatgtaattgttaggacaacccaatcttgccttgttttatcccagctacgactagta 346
Query: 301 cttctgaaacttgctgcctaagataaacagcttccttatcaaacctctgcatctgttggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cttctgaaacttgctgcctaagataaacagcttccttatcaaacctctgcatctgttggt 286
Query: 361 atgtccctgcttgggcagacactacagcacactgtaaggaatgagcatgggtgtgcagca 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 285 atgtccctgcttgggcagacactacagcacactgtaatgaatgagcatgggtgtgcagca 226
Query: 421 tccgctgatgccttgtgtcctggga 445
|||||||||||||||||||||||||
Sbjct: 225 tccgctgatgccttgtgtcctggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_c08.g1 MSMg01no366_c08.g1 CHROMAT_FILE:
MSMg01no366_c08.g1 PHD_FILE: MSMg01no366_c08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:54 2005
(442 letters)
>mm_chr14_78297631_78298473
Length = 843
Score = 779 bits (403), Expect = 0.0
Identities = 433/443 (97%), Gaps = 1/443 (0%)
Strand = Plus / Plus
Query: 1 agatcagtggttatttgaggtcaggagtgtcttaactgaatccaccaagtctcaatttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 agatcagtggttatttgaggtcaggagtgtcttaactgaatccaccaagtctcaacttag 260
Query: 61 gctttctgcatttctgtctcccattctctctcatatgattgcttgttttctgacatgctt 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 gctttctgcatttctgtctcccattctctctcatatgattgcttgctttctgacatgctt 320
Query: 121 ggaaatactcacaaaggactttgaactttgccatactattagtttagagttagaacatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaaatactcacaaaggactttgaactttgccatactattagtttagagttagaacatca 380
Query: 181 gacctatgggtagatcccttaaaagttgatttttttt-cttaaggcacagatgcttggtg 239
|||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 381 gacctatgggtagatcccttaaaagtcgatttttttttcttaaggcacagatgcttggta 440
Query: 240 atatcagaatagtctccagatagtttctgtttgagtcacttatcctccagcccctgcacc 299
| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 441 aaatcagaacagtctccagatagtttctgtttgaatcacttatcctccagcccctgcacc 500
Query: 300 cctcccccctcaaaaaacaccaccagggaatctcctggctgagggagccaacaagagtcc 359
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccttccccctcaaaaaacaccaccagggaatctcctggctgagggagccaacaagagtcc 560
Query: 360 tcagaagtttcttaagggaaattctttcaagctctacagcctacagagatctcgtgacag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcagaagtttcttaagggaaattctttcaagctctacagcctacagagatctcgtgacag 620
Query: 420 ctagcacacagcgtgaaaatcca 442
||||||||||| |||||||||||
Sbjct: 621 ctagcacacagtgtgaaaatcca 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 843
Length adjustment: 9
Effective length of query: 433
Effective length of database: 834
Effective search space: 361122
Effective search space used: 361122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
