Query= MSMg01no367_l04.b1 MSMg01no367_l04.b1 CHROMAT_FILE:
MSMg01no367_l04.b1 PHD_FILE: MSMg01no367_l04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:56 2005
(517 letters)
>mm_chr14_111728668_111729584
Length = 917
Score = 934 bits (483), Expect = 0.0
Identities = 503/517 (97%), Gaps = 12/517 (2%)
Strand = Plus / Plus
Query: 1 aatggctgaccaagaaaatctaagaaaaataatgcttttctcaatgtacttaactcaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatggctgaccaagaaaatctaagaaaaataatgcttttctcaatgtacttaactcaata 260
Query: 61 atattagtaaatttgcctacattttattatgtggacactttaggagcgtatttttcaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atattagtaaatttgcctacattttattatgtggacactttaggagcgtatttttcaggc 320
Query: 121 tagcaccacagctaagtattttgttgttgttgttgttgttgttgttgttgttgttgaagg 180
|||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 tagcaccacagctaagtattttgttgttgttgttgttgttgttg------------aagg 368
Query: 181 taaaaatagaaatataataaaatcaggattttttgcatttattttagcaacaaaattagt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 369 taaaaatagaaatataataaaatcaggattttttgcatttattttagcaacaaaattaat 428
Query: 241 caattaatttatgctatggaagggtaagaaatgttttatttattttaaccaatgaacttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 caattaatttatgctatggaagggtaagaaatgttttatttattttaaccaatgaacttc 488
Query: 301 ttagagaaaaataagtccatagactttgacattatgtgctagacatcttcatatgcttcc 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 489 ttagagaaaaataagtccatagattttgacattatgtgctagacatcttcatatgcttcc 548
Query: 361 tgctagcataaagctttgaaagaatctagaactttttattgtaatatggaaggtccatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tgctagcataaagctttgaaagaatctagaactttttattgtaatatggaaggtccatat 608
Query: 421 atatttactatatttatagtcttatgaactatatattcagcatgactatataaatcttac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 atatttactatatttatagtcttatgaactatatattcagcatgactatataaatcttac 668
Query: 481 ttccaaatatcaagagaattaattaatttatatcata 517
|||||||||||||||||||||||||||||||||||||
Sbjct: 669 ttccaaatatcaagagaattaattaatttatatcata 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 917
Length adjustment: 10
Effective length of query: 507
Effective length of database: 907
Effective search space: 459849
Effective search space used: 459849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no367_l04.g1 MSMg01no367_l04.g1 CHROMAT_FILE:
MSMg01no367_l04.g1 PHD_FILE: MSMg01no367_l04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:04:56 2005
(575 letters)
>mm_chr14_111883596_111884569
Length = 974
Score = 1052 bits (544), Expect = 0.0
Identities = 569/582 (97%), Gaps = 10/582 (1%)
Strand = Plus / Minus
Query: 1 actttgagaccttttgcccattaaacaagacataatttttaaaacaaagattatttacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 actttgagaccttttgcccattaaacaagacataatttttaaaacaaagattatttacat 902
Query: 61 atccgacaaattattgttatatttcaaaattatactatactgagttgccagatatttttg 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 agccgacaaattattgttatatttcaaaattatactatactgagttgccagatatttttg 842
Query: 121 tcagggaaaaaaaaacactgacatctggttgtttaatata--------tgtgtgtgtgtg 172
|||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 841 tcaggg-aaaaaaaacactgacatctggttgtttaatatatgtgtgtgtgtgtgtgtgtg 783
Query: 173 tgtgtgtgttctctgaactaatttgtctttctgaaaaagtgagtaaatttaaattttaga 232
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 782 tgtgtgtgttctctgaactaatttgtctttctg-aaaagtgagtaaatttaaattttaga 724
Query: 233 attatcagaataccgagtaaaaatgtaggcaacttcagatgatttcttgagtctcttagt 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 attatcagaataccgagtaaaaatgtaggcaacttcagatgatttcttgagtctcttagt 664
Query: 293 ggaaacgttaagtgttaaatgagggaggtgggtgcttgttcataaaagaggaaaaggctc 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ggaaacgttaagtgttaaatgagggaggtgggtgcttgttcataaaagaggaaaaggctc 604
Query: 353 tgagaaaatgcaaatgtgcagtattgatgtgagccatccaactctacagcttctgccctt 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tgagaaaatgcaaatgtgcagtattgatgtgagccatccaactctacagcttctgccctt 544
Query: 413 gctggacctcatttccatactatagaataaaactgtatcttcaaagaacttgagagcaat 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gctggacctcatttccatactatagaataaaactgtatcttcaaagaacttgagagcaat 484
Query: 473 acgtaatagatttaaaaacacttgtgagaatcctgtgcattttctctctttttactttct 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 acgtaatagatttaaaaacacttgtgagaatcctgtgcattttctctctttttactttct 424
Query: 533 ttaaagtgatgggaaaaagaaacattattttaacatttcttt 574
|||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 423 ttaatgtgatgggaaaaagaatcattattttaacatttcttt 382
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 974
Length adjustment: 10
Effective length of query: 565
Effective length of database: 964
Effective search space: 544660
Effective search space used: 544660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
