Query= MSMg01no368_g18.b1 MSMg01no368_g18.b1 CHROMAT_FILE:
MSMg01no368_g18.b1 PHD_FILE: MSMg01no368_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:51 2005
(484 letters)
>mm_chr14_23902774_23903657
Length = 884
Score = 897 bits (464), Expect = 0.0
Identities = 473/476 (99%)
Strand = Plus / Minus
Query: 9 tcctccccctccaaatgtggaaaagagtttcaaaatggaaacctatgaaagagagagtag 68
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tcctcccccaccaaatgtggaaaagagtttcaaaatggaaacctatgaaagagagagtag 625
Query: 69 aataagaacacagagagcaaatagacacaggaaaccagtgggaccagccccacatccccc 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aataagaacacagagagcaaatagacacaggaaaccagtgggaccagccccacatccccc 565
Query: 129 tctaaccagccccagatggaggcgtccaccatagcagccactcctacattgttgtggctt 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tctaaccagccccagatggaggcgtccaccatagcagccactcctacattgttgtggctt 505
Query: 189 ggtagcatcagttgtttagcatgtcattgcaaagttctctgaacacttccctctggcttt 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggtagcatcagttgtttagcatgtcattgcaaagttctctgaacacttccctctggcttt 445
Query: 249 gtccatttgtagacaccactctggagttggggtatgacaagaattagaattgacatccac 308
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 444 gtccatttgtagacaccactctggaattggggtatgacaagaattagaattgacatccac 385
Query: 309 caaactctctgtgtcctggagccagcctcaatggctctgccactgtcacatcaagctcca 368
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caaactctgtgtgtcctggagccagcctcaatggctctgccactgtcacatcaagctcca 325
Query: 369 tccctcccggccactctgtgtctgcacccatgacacctgtcagaaactttcaagtgtctg 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tccctcccggccactctgtgtctgcacccatgacacctgtcagaaactttcaagtgtctg 265
Query: 429 ctcatttctttatcaatgtggcctgcacagcccaggcaaaggaggagtgacatttg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctcatttctttatcaatgtggcctgcacagcccaggcaaaggaggagtgacatttg 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_g18.g1 MSMg01no368_g18.g1 CHROMAT_FILE:
MSMg01no368_g18.g1 PHD_FILE: MSMg01no368_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:51 2005
(477 letters)
>mm_chr14_23760982_23761858
Length = 877
Score = 882 bits (456), Expect = 0.0
Identities = 474/484 (97%), Gaps = 7/484 (1%)
Strand = Plus / Plus
Query: 1 atgtcctcatgcttgcattcaaggaatttaccaactaaactatcctttccacagtccttt 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 194 atgtcctcatgcttgcattcaaggactttaccaactaaactatcctttccacagtccttt 253
Query: 61 ctaactaaaccctaactggcaagacatctggatggggtcacacttctgccacccatggga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ctaactaaaccctaactggcaagacatctggatggggtcacacttctgccacccatggga 313
Query: 121 gggatggtaatagacatttgcattttgggccagcccttcactcaggagcttttacctact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 gggatggtaatagacatttgcattttgggccagcccttcactcaggagcttttacctact 373
Query: 181 catttgatttggtcctcaccttgacagcaggacagcagagtaggatttaccatgccattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 catttgatttggtcctcaccttgacagcaggacagcagagtaggatttaccatgccattc 433
Query: 241 ttgaagaggacattgaagaacatttggg-------atttgtccggagtctcccagctagt 293
|||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 434 ttgaagaggacattgaagaacatttggggtaaaggatttgtccggagtctcccagctagt 493
Query: 294 cagaggtggatcttctactaaggcaatctcaggattgtcctgaagtgcatatttatcaga 353
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 494 cagaggtggatcttctactaaggcaatctcaggattgtcctgaagcgcatatttatcaga 553
Query: 354 agttactgtcaaaatccaacaacatgacagtatgaccagcccaagatcaattcagccacc 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 agttactgtcaaaatccaacaacatgacagtatgaccagcccaagatcaattcagccacc 613
Query: 414 cagagcttcaggtatatggaagaagtccttgaattagatgttcactgtggaagagcaatt 473
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 614 cagagcttcaggtatatggaagaagtccttgaattagacgttcactgtggaagagcaatt 673
Query: 474 ctat 477
||||
Sbjct: 674 ctat 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
