CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAATTTGGATCCCATCATCTAAAGCACAGAGGAGAACAGGAAAGT
CGTATTGCTATAATGCTTAGATTATCAATCATCTTGACAGTTTATTGGCT
TTATCACCACACATACCATTAAAATGATGTCTGGCCCAGACTGTCAAAAG
CAAACATTAAACAGACCAGGATTAAAAAGCAGATCGCAAACAGCACTCCA
GTCAAGTTTCCCCTCTGCTCTGAAATTAGTTAGAGCACCTGACGAAGAAA
CTGGCCCTGGACTTTGAAGAAATACACATTCCAAAAGGCTCCGAGTCAAC
TCAGACCTGACAGGCTGATAGGTCATGTCTTGTTATGGTAAATCTCAGTC
CTTCTCGGCTGATTTATCACACACTCTGTGGAATAGAATTATTGCTATTG
GTGAAACGGAGAAGGAAGGGAGAGGAAAGGAAATACGAGAGAGAGAGAGA
GGCAAATACCATAATTTTCCTCATCTTGCAATCCAGGGCTTGCATCAAAA
GGGCCAAGCTAGCTCCCTGAAGTGGGGTAGGAATGCTAATAAATTCACAC
TACTATGCAAACAGATTAACATTACCCCCACACAGGTTATTAAAATAATT
TTACAGATTCGGAAGAACCGACTAGGCAGCCGAAGACACATTCATAATTC
AAGAGCTGGAGACAGGGAAAAAAGTACGAACCTTATACGTTTTTG

CTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTCTGTCTTTTTGTTTTCCTCTTTAGTGTGGT
GCTGGCTGTGGACTTGTGTTTTACCTTTGTTATGTTGAGATATGTCTCCT
GAATCACTAAATTCTCCAGGACACTTATCATGAAGAGATGTTGGGTTTTA
TCAAAGGCCTTCTTGGCATCTAATGAGATGATTATATTGTTTCTGACCTT
AAGTCCATTTATGTGGTGGATTACATTATTAGTTTTTGTATGTTGAATCT
CCCCTAACTCTTTGGGATGAATCTGGATGATTTTTTTGATGTGTTCTTTG
ATTCAGCTTACAAATATTTTACTAAGAATTTTTGCCTCTATGTTCACCAG
AGAGATTGACCCCAACATTTCCTTTTTTTGTTTTATTTTGTTTTGGTGGC
AGTATATACCAGTATATTAGGTATGTTTCTCTTGCTGTGATGATGCAATA
TGATCAAGGCAACTTATAGAAGAAATGGGTTTGGTTTATAGTCCCAGGGG
GACAAGAGTCCATGATGACCCANGAGGGGTAGCAGGTGGCAGTCCTTGCA
GCCAGAACAACAACTGAGAACTTACACCTTGAATCCCCGTAGAGAAAATG
CACACAAGCGGCTTTGTGGGGGGGTTTGAAAATGCTTGAACTATTGGGAG
TGTCCCTATTAAGCCACGGGGGCTTGTTGGAATAAAGGGGTCTTGTTGAA

Query= MSMg01no368_j23.b1 MSMg01no368_j23.b1 CHROMAT_FILE:
MSMg01no368_j23.b1 PHD_FILE: MSMg01no368_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:07 2005
         (560 letters)



>mm_chr14_22909719_22910678
          Length = 960

 Score = 1006 bits (520), Expect = 0.0
 Identities = 557/586 (95%), Gaps = 26/586 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   catctaaagcacagaggagaacaggaaagtcgtattgctataatgcttagattatcaatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 catctaaagcacagaggagaacaggaaagtcgtattgctataatgcttagattatcaatc 572

                                                                       
Query: 61  atcttgacagtttattggctttatcaccacacataccattaaaatgatgtctggcccaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 atcttgacagtttattggctttatcaccacacataccattaaaatgatgtctggcccaga 512

                                                                       
Query: 121 ctgtcaaaagcaaacattaaacagaccaggattaaaaagcagatcgcaaacagcactcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ctgtcaaaagcaaacattaaacagaccaggattaaaaagcagatcgcaaacagcactcca 452

                                                                       
Query: 181 gtcaagtttcccctctgctctgaaattagttagagcacctgacgaagaaactggccctgg 240
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 451 gtcaagtttcccctctgctctgaaattagttagagcaactgacgaagaaactggccctgg 392

                                                                       
Query: 241 actttgaagaaatacacattccaaaaggctccgagtcaactcagacctgacaggctgata 300
           ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 actttgaagaaatacacagcccaaaaggctccgagtcaactcagacctgacaggctgata 332

                                                                       
Query: 301 ggtcatgtcttgttatggtaaatctcagtccttctcggctgatttatcacacactctgtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ggtcatgtcttgttatggtaaatctcagtccttctcggctgatttatcacacactctgtg 272

                                                                       
Query: 361 gaatagaattattgctattggtgaaacggagaaggaagggagaggaaaggaaatac---- 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct: 271 gaatagaattattgctattggtgaaacggagaaggaagggagaggaaaggaaatacgaga 212

                                                                       
Query: 417 ----------------------gagagagagagagaggcaaataccataattttcctcat 454
                                 ||||||||||||||||||||||||||||||||||||||
Sbjct: 211 gagagagagagagagagagagagagagagagagagaggcaaataccataattttcctcat 152

                                                                       
Query: 455 cttgcaatccagggcttgcatcaaaagggccaagctagctccctgaagtggggtaggaat 514
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 cttgcaatccagggcttgcatcaaaagggccaagctagctccctgaagtggggtaggaat 92

                                                         
Query: 515 gctaataaattcacactactatgcaaacagattaacattaccccca 560
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91  gctaataaattcacactactatgcaaacagattaacattaccccca 46


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space:   522500
Effective search space used:   522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)