Query= MSMg01no369_b03.b1 MSMg01no369_b03.b1 CHROMAT_FILE:
MSMg01no369_b03.b1 PHD_FILE: MSMg01no369_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:42 2005
(337 letters)
>mm_chr14_23548916_23549656
Length = 741
Score = 586 bits (303), Expect = e-172
Identities = 328/339 (96%), Gaps = 8/339 (2%)
Strand = Plus / Minus
Query: 5 gaattctccctagcaatagattgactgattttatgcggttaacccttgtcaaatacgtat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaattctccctagcaatagattgactgattttatgcggttaacccttgtcaaatacgtat 482
Query: 65 gcgttttgagagttgtgtgtttagtctaaggtgggggaatgcacctgcagagatggctgg 124
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtgttttgagagttgtgtgtttagtctaaggtgggggaatgcacctgcagagatggctgg 422
Query: 125 aagcctcttcaccccagaacccca-----tcaggaaaatctgtagccaaagggtaaaact 179
||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||
Sbjct: 421 aagcctcttcaccccagaa-cccagattttcaggaaaatctgtagccaaaaagtaaaact 363
Query: 180 ggtcagatgctgaggaccatggggatttggaaacaagtaagtttcactgactactttagg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ggtcagatgctgaggaccatggggatttggaaacaagtaagtttcactgactactttagg 303
Query: 240 gctgggaaggcttcacagagaaggtaaccctgacctagatttagtgaattgtc-tgtgat 298
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 302 gctgggaaggcttcacagagaaggtaaccctgacctagatttagtgaattgtcat-tgat 244
Query: 299 gtcaggggtcatttcagagtaggaggaagggcaattcag 337
|||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gtcaggggtcatttcagagtaggaggaagggcaattcag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 741
Length adjustment: 9
Effective length of query: 328
Effective length of database: 732
Effective search space: 240096
Effective search space used: 240096
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no369_b03.g1 MSMg01no369_b03.g1 CHROMAT_FILE:
MSMg01no369_b03.g1 PHD_FILE: MSMg01no369_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:42 2005
(335 letters)
>mm_chr14_23398175_23398910
Length = 736
Score = 617 bits (319), Expect = 0.0
Identities = 331/335 (98%), Gaps = 1/335 (0%)
Strand = Plus / Plus
Query: 1 caaccaccagcgagtgtctgttgctcacagtctggaggcgggcagtctgagggcagggtc 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 caaccaccagcgagtgtctgttgctcacagtctggaggtgggcagtctgagggcagggtc 260
Query: 61 cagcagcagatggattttcgtgatgtgtcccttgcctgtccttgcattggggacagagca 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagcaggagatggattttcgtgatgtgtcccttgcctgtccttgcattggggacagagca 320
Query: 121 ggaggagggaaggggaagaagaggaaatgttcttgtctgctcttatcagtaaattaattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaggagggaaggggaagaagaggaaatgttcttgtctgctcttatcagtaaattaattc 380
Query: 181 atcctttcaagagctctacctttaggacttaataacttctcaggagatttggagttgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atcctttcaagagctctacctttaggacttaataacttctcaggagatttggagttgaaa 440
Query: 241 gatttgaatggtgggagtgagttgtaaacagtgctttacaaatgcgcccctt-atggccc 299
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 gatttgaatggtgggagtgagttgtaaacagtgctttacaaatgcgcccctttatggccc 500
Query: 300 tcatccatgggtgctttatcataagtagaggaaga 334
||||||||||||||||||||| |||||||||||||
Sbjct: 501 tcatccatgggtgctttatcagaagtagaggaaga 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 736
Length adjustment: 9
Effective length of query: 326
Effective length of database: 727
Effective search space: 237002
Effective search space used: 237002
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
