XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTA
TTCCTATGGTTATGGTGCTAATGTTCCCACAACAGCTAAAAGACGACTAA
AGCAAAGGTAAAATCGATATGGATTTATCTTATCTACTCAAGCTAACTGT
AATTATATAGTACATTCTGATAATGTGCTGAGTTGAATGATAAAGCTACT
TGTTCTTAATATTCATAAATATTAAAGTGCTCACAAAGTAGGACATGGTA
ATAACCATGAACTTCATCTATATTTAAGTGAATTTAATGGTTAGTAGATG
TGTACATTAGAATGTTCATGGTTTTAGATGCAATAACTTTGAAAGCCATT
TTATTTTCACATTAATTTCAGATAAGTACAAATGCTTTGTAGCAATAATT
TTCAGGCTAGAACTAATTGAACTACCTTCAATTTCTATATCCCTTGTTTA
TTATTTATGTGCCTATATTTCTTGATGTGTATCTTAACATGTAATATATT
ATTGTATATAATACATACTAAGAAATATTGGAGAAAGCATATACATCGCA
GTTGATACTGCACAGAATTGTTAGTTCCATGTCTTATGGCTGTGACCTAA
TCCTTGATAAATACCATTATCGATAATGGAAGGTATTGTTTGTTTCTCAG
TTTGCTTTATTGTTCCCCTTGTGTCTCTTGTTCATTTTTTACGATCATGG
AACTGCTTTCCCCCATTTTGTTCCTGACTTTTTTTCATTGTTTTCCGAAT
TTTTTCCCTCCCCCTN

GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCTTGAATTTTTTAGACAAAGCCTTACTAAGTTGCTG
AGGCTAGCCATATACTCATTTGATAACCCAAGTAGGTCTTTAACTTAAAA
TCCTTTCCTGAGTAAGAAAACTATAGGCCTGAACTGCCAGGCCCAGCTAA
CTTCAAATTTTACCTGGACAAAAAGTTATTCCAGAAACAAAACTGAGCCC
AGCAATCCCATGTCCACTTAACTGAAAACGTGATTCAAACATTTAATTGT
TCCTGAAACATAATTCACAATAGCAGAAAGGTAGGAAGAGCCTGAATGTT
TACCAGAGAAGGAATGAACTATAAATCTATGGTAAATGTACAAATACATG
GAACAGAATATTATTTATTAGTAAAATGTCACAAAGTATAAGGTATATGC
TACATACAATGTAGATGAACCTAGAAAACAGTAAGCTCAATAAAAGAAGT
TAGATGCACAAGGTCAGAACCTGTATGATTCTGTTTATCCAACACTGCTG
AGTAGGTAAACACACAGAGAAGCCAGTTGGTCTGTCTGTTTAGACAGATG
GAAGTCAGAGGCTGGGGGTGGGTAAGAGTGAGTGATTGCTTAGTGGGCAC
AGGCTTTATTACCTAGTAAAAGAAATGTCTTAGAACTAGTTAGAAGCGAT
TGCCCCATCTTCTGAATGACTGTAAGATGGTTTACTTTACAATGATTAAT
TTTN

Query= MSMg01no369_k03.b1 MSMg01no369_k03.b1 CHROMAT_FILE:
MSMg01no369_k03.b1 PHD_FILE: MSMg01no369_k03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:25 2005
         (457 letters)



>mm_chr14_99586757_99587613
          Length = 857

 Score =  876 bits (453), Expect = 0.0
 Identities = 453/453 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttattcctatggttatggtgctaatgttcccacaacagctaaaagacgactaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttattcctatggttatggtgctaatgttcccacaacagctaaaagacgactaa 264

                                                                       
Query: 65  agcaaaggtaaaatcgatatggatttatcttatctactcaagctaactgtaattatatag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agcaaaggtaaaatcgatatggatttatcttatctactcaagctaactgtaattatatag 324

                                                                       
Query: 125 tacattctgataatgtgctgagttgaatgataaagctacttgttcttaatattcataaat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tacattctgataatgtgctgagttgaatgataaagctacttgttcttaatattcataaat 384

                                                                       
Query: 185 attaaagtgctcacaaagtaggacatggtaataaccatgaacttcatctatatttaagtg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 attaaagtgctcacaaagtaggacatggtaataaccatgaacttcatctatatttaagtg 444

                                                                       
Query: 245 aatttaatggttagtagatgtgtacattagaatgttcatggttttagatgcaataacttt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aatttaatggttagtagatgtgtacattagaatgttcatggttttagatgcaataacttt 504

                                                                       
Query: 305 gaaagccattttattttcacattaatttcagataagtacaaatgctttgtagcaataatt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaaagccattttattttcacattaatttcagataagtacaaatgctttgtagcaataatt 564

                                                                       
Query: 365 ttcaggctagaactaattgaactaccttcaatttctatatcccttgtttattatttatgt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttcaggctagaactaattgaactaccttcaatttctatatcccttgtttattatttatgt 624

                                            
Query: 425 gcctatatttcttgatgtgtatcttaacatgta 457
           |||||||||||||||||||||||||||||||||
Sbjct: 625 gcctatatttcttgatgtgtatcttaacatgta 657


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space:   378609
Effective search space used:   378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no369_k03.g1 MSMg01no369_k03.g1 CHROMAT_FILE:
MSMg01no369_k03.g1 PHD_FILE: MSMg01no369_k03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:25 2005
         (564 letters)



>mm_chr14_99599270_99600233
          Length = 964

 Score =  783 bits (405), Expect = 0.0
 Identities = 405/405 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttgaattttttagacaaagccttactaagttgctgaggctagccatatactcatttgat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 cttgaattttttagacaaagccttactaagttgctgaggctagccatatactcatttgat 346

                                                                       
Query: 61  aacccaagtaggtctttaacttaaaatcctttcctgagtaagaaaactataggcctgaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 aacccaagtaggtctttaacttaaaatcctttcctgagtaagaaaactataggcctgaac 286

                                                                       
Query: 121 tgccaggcccagctaacttcaaattttacctggacaaaaagttattccagaaacaaaact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tgccaggcccagctaacttcaaattttacctggacaaaaagttattccagaaacaaaact 226

                                                                       
Query: 181 gagcccagcaatcccatgtccacttaactgaaaacgtgattcaaacatttaattgttcct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gagcccagcaatcccatgtccacttaactgaaaacgtgattcaaacatttaattgttcct 166

                                                                       
Query: 241 gaaacataattcacaatagcagaaaggtaggaagagcctgaatgtttaccagagaaggaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 gaaacataattcacaatagcagaaaggtaggaagagcctgaatgtttaccagagaaggaa 106

                                                                       
Query: 301 tgaactataaatctatggtaaatgtacaaatacatggaacagaatattatttattagtaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 tgaactataaatctatggtaaatgtacaaatacatggaacagaatattatttattagtaa 46

                                                        
Query: 361 aatgtcacaaagtataaggtatatgctacatacaatgtagatgaa 405
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45  aatgtcacaaagtataaggtatatgctacatacaatgtagatgaa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space:   528516
Effective search space used:   528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)