Query= MSMg01no369_n02.b1 MSMg01no369_n02.b1 CHROMAT_FILE:
MSMg01no369_n02.b1 PHD_FILE: MSMg01no369_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:39 2005
(220 letters)
>mm_chr14_64901336_64901956
Length = 621
Score = 381 bits (197), Expect = e-110
Identities = 215/221 (97%), Gaps = 1/221 (0%)
Strand = Plus / Minus
Query: 1 agcaagatcatgtctaaaaataaaggaaaaaaagaaagttgaggatacatctcggtggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 421 agcaagatcatgtctaaaaataaaggaaaaaaagaaagttgaggatacatctcagtggct 362
Query: 61 tgcctggtgggtgcaaggtcttcggttcaaatcccagtactacacag-aaaaaaatgatg 119
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 361 tgcctggtgggtgcaaggtcttcggttcaaatcccagtactacacagaaaaaaaatgttg 302
Query: 120 ttctaaatatgtaaatagttatatcaagataaaagcttgagggccaggcatgcctgtaat 179
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttctaaatatgtaaatagttttatcaagataaaagcttgagggccaggcatgcctgtaat 242
Query: 180 gtatgacgtggtaagctgagtcaggacgtgaataaaaggcc 220
| | |||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcaggacgtggtaagctgagtcaggacgtgaataaaaggcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 621
Length adjustment: 9
Effective length of query: 211
Effective length of database: 612
Effective search space: 129132
Effective search space used: 129132
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no369_n02.g1 MSMg01no369_n02.g1 CHROMAT_FILE:
MSMg01no369_n02.g1 PHD_FILE: MSMg01no369_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:39 2005
(169 letters)
>mm_chr14_64721379_64721946
Length = 568
Score = 282 bits (146), Expect = 6e-81
Identities = 158/162 (97%), Gaps = 1/162 (0%)
Strand = Plus / Plus
Query: 1 actcagcttacagcgggtggccatgttactcattctcctcatgacgaatctcacatccat 60
||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 201 actcagcttccagcgggtggccatgttactcattctccttatgacgaatctcacgtccat 260
Query: 61 agtgaactgtttaacctttcatgaggcagtcattctgatggacatttccaagacttaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtgaactgtttaacctttcatgaggcagtcattctgatggacatttccaagacttaaaa 320
Query: 121 aaaaatttacattagtatatttagggtgtgtgtgtgtgtgtg 162
||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaatt-acattagtatatttagggtgtgtgtgtgtgtgtg 361
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 568
Length adjustment: 8
Effective length of query: 161
Effective length of database: 560
Effective search space: 90160
Effective search space used: 90160
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
