Query= MSMg01no370_k21.b1 MSMg01no370_k21.b1 CHROMAT_FILE:
MSMg01no370_k21.b1 PHD_FILE: MSMg01no370_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:48 2005
(377 letters)
>mm_chr14_84198682_84199458
Length = 777
Score = 694 bits (359), Expect = 0.0
Identities = 371/375 (98%)
Strand = Plus / Minus
Query: 3 cggaattcccaagccattgtggactttccatattcttcatccttctctgcatgatttgta 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 cggaattcccaagccattgtggactttccatattcttcatccttctctgcatgatttgta 390
Query: 63 ctaaccattgtagctatatccagttgattgaatcatgaaaaccatagatggaaagggcat 122
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 389 ctaatcattgtagctatatccagttgattgaatcatggaaaccatagatggaaagggcat 330
Query: 123 ctcctaaatgctagaattttccttcaataaactaaacaaactgaacaccaagtcagttta 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctcctaaatgctagaattttccttcaataaactaaacaaactgaacaccaagtcagttta 270
Query: 183 gtcattctaggaaacaggattttattgtgaaaaatcaatagaaaaccagtagaaacaagc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gtcattctaggaaacaggattttattgtgaaaaatcaatagaaaaccagtagaaacaagc 210
Query: 243 tttggtgttttgtttagttttgagattataatttaattacattctattactgttctcttt 302
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 209 tttggtgttttgtttagttttgagattataatttaattacattctatttctgttctcttt 150
Query: 303 ctccctacaaatcctcacatatgtcctttcagttctacttctacttcaaatttatactct 362
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 149 ctccctacaaatcctcacatatgtcctttcagttctacttctacttcaaatttgtactct 90
Query: 363 cttttttcattgtta 377
|||||||||||||||
Sbjct: 89 cttttttcattgtta 75
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 377
Length of database: 777
Length adjustment: 9
Effective length of query: 368
Effective length of database: 768
Effective search space: 282624
Effective search space used: 282624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_k21.g1 MSMg01no370_k21.g1 CHROMAT_FILE:
MSMg01no370_k21.g1 PHD_FILE: MSMg01no370_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:48 2005
(247 letters)
>mm_chr14_84026991_84027637
Length = 647
Score = 402 bits (208), Expect = e-117
Identities = 231/239 (96%), Gaps = 1/239 (0%)
Strand = Plus / Plus
Query: 1 ttgatcttacaaaaataaaaagaaggttcataacaaagctgcttgtcaatttaggttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 201 ttgatcttacaaaaataaaaagaaggttcataacaaagctgcttgtcaagttatgttgat 260
Query: 61 atgttcataactggaatgcagtggaagaaaaatgtttttgttgttgttgttttgtttttt 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 atgttcataactggaatgcagtggaagaaatatgtttttgttgttgttgttttgtttttt 320
Query: 121 tttgttttgttttgtttattattaacatctctcttanaaagtaataaaatttatgtggtc 180
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 tt-gttttgttttgtttattattaacatctctcttagaaagtaataaaatttatgtggtc 379
Query: 181 agttttgtttaaagtttgggaaacatgttgcatctggcatttgattttaatatatatat 239
||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 380 agttttggttaaagtttgggaagcatgttgcatctgggatttgattttaatatatatat 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
