Query= MSMg01no371_b17.b1 MSMg01no371_b17.b1 CHROMAT_FILE:
MSMg01no371_b17.b1 PHD_FILE: MSMg01no371_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:23 2005
(386 letters)
>mm_chr14_123570456_123571240
Length = 785
Score = 700 bits (362), Expect = 0.0
Identities = 380/386 (98%), Gaps = 1/386 (0%)
Strand = Plus / Plus
Query: 1 aaagcctgaccatgggaagtaagcttgtaagagctgcaatttgaacagtcaggaatgaca 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaagcctgaccatgggaagcaagcttgtaagagctgcaatttgaacagtcaggaatgaca 260
Query: 61 aattgagacaatgcaatcttaagagctagaataaattttgctgaactcgtagaaataaga 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattgagacaacgcaatcttaagagctagaataaattttgctgaactcgtagaaataaga 320
Query: 121 ggaatatatttgaccctaagattaaatattccacctcataagtatttgttaagtgtgcaa 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaatctatttgaccctaagattaaatattccacctcataagtatttgttaagtgtgcaa 380
Query: 181 agcagaacattttgcatttttctttgttataatgaatgactttccattttcttataatag 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcagaacattttgcattttt-tttgttataatgaatgactttccattttcttataatag 439
Query: 241 ctttttagaattttaatctctgatggggtactcccagaggaattagtgtctctctaatta 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttttttagaattttaatctctgatggggtactcccagaggaattagtgtctctctaatta 499
Query: 301 cagaatatattttccaaatgtttagtcaatatttgctttggggagtaaaagaggtactat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cagaatatattttccaaatgtttagtcaatatttgctttggggagtaaaagaggtactat 559
Query: 361 tcatttcaacacaaggtgaatagatt 386
||||||||||||||||||| ||||||
Sbjct: 560 tcatttcaacacaaggtgactagatt 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 785
Length adjustment: 9
Effective length of query: 377
Effective length of database: 776
Effective search space: 292552
Effective search space used: 292552
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_b17.g1 MSMg01no371_b17.g1 CHROMAT_FILE:
MSMg01no371_b17.g1 PHD_FILE: MSMg01no371_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:23 2005
(495 letters)
>mm_chr14_123716743_123717637
Length = 895
Score = 907 bits (469), Expect = 0.0
Identities = 485/491 (98%), Gaps = 2/491 (0%)
Strand = Plus / Minus
Query: 5 gaattctttttattgttcttttacccagtgttctctgccttccacagtaatgtgcggttc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gaattctttttattgttcttttacccagtgttctctgccttccacagtaatgtgcggttc 488
Query: 65 catacatcataatagtcatgttatagaagttataaaaaaagaagctcagatggagagatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 catacatcataatagtcatgttatagaagttataaaaaaagaagctcagatggagagatg 428
Query: 125 cttgtgattactaacactcttgtgttgaaaaattttatatgctgttctttcttacagatc 184
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 427 cttgtgattactaacactcttgtgttgaagaattttatatgctgttctttcttacagatc 368
Query: 185 caaaacagaccctgtcacgggagctgtgaaaaatacaaagtaccaccaactttagtaagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 caaaacagaccctgtcacgggagctgtgaaaaatacaaagtaccaccaactttagtaagc 308
Query: 245 atgacaagttctgtcttccctgtgcatttgagtttcaaatatactattttctctttcata 304
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 307 atgacaagttctgtcttccctgtgcatttgaatttcaaatatactattttctccttcata 248
Query: 305 aaaatataaaaatttagactggaaagttgtttcaagggttaatgcaaacacaagggccta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 aaaatataaaaatttagactggaaagttgtttcaagggttaatgcaaacacaagggccta 188
Query: 365 tttaaaccccagcacccacatttaaagagccagatatggcctcatgtgtttataacccta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tttaaaccccagcacccacatttaaagagccagatatggcctcatgtgtttataacccta 128
Query: 425 gaactggagggaagataaaagttcggtgagagacccgggttcaagaatactaagaatgga 484
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 127 gaactggagggaagataaaagttcggtgagagacccgggttcaagaatacaaag--tgga 70
Query: 485 aaagaatctag 495
|||||||||||
Sbjct: 69 aaagaatctag 59
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
