Query= MSMg01no371_f16.b1 MSMg01no371_f16.b1 CHROMAT_FILE:
MSMg01no371_f16.b1 PHD_FILE: MSMg01no371_f16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:45 2005
(384 letters)
>mm_chr14_76071939_76072716
Length = 778
Score = 659 bits (341), Expect = 0.0
Identities = 370/383 (96%), Gaps = 6/383 (1%)
Strand = Plus / Minus
Query: 1 tcccacggaggcatattcccaatactactgtgttgcacgttgacatttgaacagtgtgtc 60
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 577 tcccacggaggcatatttccaatactactgtgttgcacattgacatttgaacagtgtgtc 518
Query: 61 tcccatacaaccatgactggcaatgggctcagacggagaaaaccatatttaatggctagc 120
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 517 tcccatacaaccatgactggcaatgggctc------agaaaaccatatttaatggctagc 464
Query: 121 tatctgaagtagcagaggggtatctgggatggacagactggagtttgagagagtttgttg 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 463 tatctgaagtagcagaggggtatctgggatggacagtctggagtttgagagagtttgttg 404
Query: 181 gacaggctgccgggtatgggtcggctacagaataggatatttcaaatcagaacatctcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gacaggctgccgggtatgggtcggctacagaataggatatttcaaatcagaacatctcaa 344
Query: 241 tgctttcccttcaatttagtccctacattgctttctggcaagcatggctctgggccatcg 300
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cgctttcccttcagtttagtccctacattgctttctggcaagcatggctctgggccatcg 284
Query: 301 ctcatgtcatgtgatgaaggggtgctgtgcaggctggatgctctactcaatggattttct 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ctcatgtcgtgtgatgaaggggtgctgtgcaggctggatgctctactcaatggattttct 224
Query: 361 cctgtcttagtctcccatgggag 383
|||||||| ||||||||||||||
Sbjct: 223 cctgtcttcgtctcccatgggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 778
Length adjustment: 9
Effective length of query: 375
Effective length of database: 769
Effective search space: 288375
Effective search space used: 288375
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_f16.g1 MSMg01no371_f16.g1 CHROMAT_FILE:
MSMg01no371_f16.g1 PHD_FILE: MSMg01no371_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:45 2005
(481 letters)
>mm_chr14_75945472_75946352
Length = 881
Score = 855 bits (442), Expect = 0.0
Identities = 466/474 (98%), Gaps = 2/474 (0%)
Strand = Plus / Plus
Query: 9 attctggggctc-atgctcaggaccttttgtttgatcaataaaccgtctaccaatttagc 67
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 attctggggctcga-gctcaggaccttttgtttgatcaataaaccgtctaccaatttagc 267
Query: 68 tttctctctggcctcaaacctgtttcctttctgaaaatattttgtcgtagtaacacagaa 127
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 268 tttctctctggcctcaaacctgtttcctttctgaaaatattttgtcatagtaacacagaa 327
Query: 128 agaattatgagccattactttaaaatgagtaaatgtattcgcaatctctagggtgcaggc 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 agaattatgagccattactttaaaatgagtaaatgtattcgcaatctctagggtgcaggc 387
Query: 188 tgcaaatttctatattaggattaaagtacaggtaagtgctgtcaacgcaagccacaggtc 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tgcaaatttctatattaggattaaagtacaggtaagtgctgtcaacgcaagccacaggtc 447
Query: 248 tcatcttaaagggaatgaaaaaatagtttatcctagagccattttgagtgactatggccc 307
|||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||
Sbjct: 448 tcatcttaaagggaatgaaaaactagtttatcctggagccattttgagtgacgatggccc 507
Query: 308 aaggacacagatttaacttaccccaaagtccaggctctgtcatggaagcagtttcatgaa 367
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 508 aaggacacagatttaacttaccccaaagtccagactctgtcatggaagcagtttcatgaa 567
Query: 368 cctttatgtttgtgtttcagaatgaaggaagtcataagtcaggataagtttaaggtgtat 427
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 568 cctttatgtttgtgtttcagaacgaaggaagtcataagtcaggataagtttaaggtgtat 627
Query: 428 tgatggatgtatcagaaaggcaggtacggcaagcagagggaagcttttccatag 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tgatggatgtatcagaaaggcaggtacggcaagcagagggaagcttttccatag 681
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
