Query= MSMg01no372_p23.b1 MSMg01no372_p23.b1 CHROMAT_FILE:
MSMg01no372_p23.b1 PHD_FILE: MSMg01no372_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:52 2005
(494 letters)
>mm_chr14_113782076_113782968
Length = 893
Score = 822 bits (425), Expect = 0.0
Identities = 473/489 (96%), Gaps = 1/489 (0%)
Strand = Plus / Minus
Query: 6 ggaattcaacatctattttaaattgtataacctaatggaacaaacaatcatttctttgta 65
||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 693 ggaattcaacatctacgttaaattgtataacctaatggaacaaacaatcattt-tttgta 635
Query: 66 tcaaaataattgattgaaattttgtttaaaaaggtatcaatgcttgatattaatatctaa 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 634 tcaaaataattgattgaaattttgtttaaaaaggtatcaatgcttgatattaatatcaaa 575
Query: 126 tagtatataaatatcaaataaagaagaaaataaaatgttataagatcatttaaattatgt 185
|||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 574 tagtatgtaaatatcaaataaagaagaaaacaaaatgttataagatcatttacattatgt 515
Query: 186 aagactcctgtgtatttcacgagtgagaaacaaactgatctttaagtccataaagctcac 245
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 514 aagactcctgtgtatttcacgagtgagaaacaaactgatctttaaatccataaagctcac 455
Query: 246 atgcatttcagtgcagagtaatttgctcttatctattgggattcattttcacattctcat 305
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 454 atgcatttcagtgcagagtaatttgctcttatctattgggattcatttccacattctcat 395
Query: 306 ggctttcctggaactgtggacaccaaacacatgtatgtagggcaagaaatgtacacaaga 365
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 394 ggctttcctggaactgtggacaccaaacacatgtctgtagggcaagaaatgtacacaaga 335
Query: 366 tttgtgtatatatgctagataggctgaaatgtaacattgtgaacttaacctactaaaaaa 425
|||||| ||||||||||||||||||||||| |||||||||||||||| || |||||||||
Sbjct: 334 tttgtgaatatatgctagataggctgaaatttaacattgtgaacttatccaactaaaaaa 275
Query: 426 acaatcgtggatgacattacactgatgtacgaatttctcaggactgatacagcaagctcc 485
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 274 acaattgtggatgacattacactgatgtatgaatttctcaggactgatacagcaagctcc 215
Query: 486 acacaggga 494
|||||||||
Sbjct: 214 acacaggga 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 893
Length adjustment: 10
Effective length of query: 484
Effective length of database: 883
Effective search space: 427372
Effective search space used: 427372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_p23.g1 MSMg01no372_p23.g1 CHROMAT_FILE:
MSMg01no372_p23.g1 PHD_FILE: MSMg01no372_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:52 2005
(448 letters)
>mm_chr14_113601274_113602121
Length = 848
Score = 812 bits (420), Expect = 0.0
Identities = 441/448 (98%), Gaps = 1/448 (0%)
Strand = Plus / Plus
Query: 1 cagtttggcaagcagggagagggtacctgtgagatgtccccttctggcctctgcagacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 cagtttggcaagcagggagagggtacctgtgagatgtccccttctggcctctgcagacat 261
Query: 61 aggtatggatgtacacagacacatgctcagactcatacatataaataaataataaaacga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aggtatggatgtacacagacacatgctcagactcatacatataaataaataataaaacga 321
Query: 121 acctttaccaaactgatggaatttacctatggaagctgactgataattctaacccagtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 322 acctttaccaaactgatggaatttacctatggaagctgactgataattctaactcagtgg 381
Query: 181 ctgtggtagaaccccacccccacccccaccccagcaaaccgtgtttcctgtacttacggt 240
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 382 ctgtggtagaacccca-ccccacccccaccccagcaaaccgtgtttcctgtacttatggt 440
Query: 241 agtttggtgtgtgtagggattttctttcaaagaatgagctatgaaatgtttcatttgtac 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 agtttggtgtgtgtagggattttctttcaaagaatgagcaatgaaatgtttcatttgtac 500
Query: 301 aatgatatgataaaatacccataaaatgcattttgttccttttggtattcttcaaatttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgatatgataaaatacccataaaatgcattttgttccttttggtattcttcaaatttg 560
Query: 361 aaaagtcttattttaaagataagcatggcatcatgccatgaatgcaggcaaataggactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaaagtcttattttaaagataagcatggcatcatgccatgaatgcaggcaaataggactt 620
Query: 421 tgattataaaagcccgtgttattttctc 448
||||||| |||||| ||| |||||||||
Sbjct: 621 tgattattaaagccggtgctattttctc 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
