Query= MSMg01no373_j21.b1 MSMg01no373_j21.b1 CHROMAT_FILE:
MSMg01no373_j21.b1 PHD_FILE: MSMg01no373_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:37 2005
(440 letters)
>mm_chr14_122445952_122446791
Length = 840
Score = 835 bits (432), Expect = 0.0
Identities = 438/440 (99%)
Strand = Plus / Plus
Query: 1 cttctcaaggagtttctaggactgttggaacactggcgaaggctttagctatgtcagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttctcaaggagtttctaggactgttggaacactggcgaaggctttagctatgtcagaat 260
Query: 61 tcaatcttaaaaggcacttataataggataatactaaaagagagcgtgtggatccataca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaatcttaaaaggcacttataataggataatactaaaagagagcgtgtggatccataca 320
Query: 121 ctagactaacgtgggaatggaatattaatgtgtgggttagagaggacaccagactctagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctagactaacgtgggaatggaatattaatgtgtgggttagagaggacaccagactctagg 380
Query: 181 aggtgagtttccgtgaaactctttgcctgagatgcctgcaggccacagagaaccgtgtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggtgagtttccgtgaaactctttgcctgagatgcctgcaggccacagagaaccgtgtgg 440
Query: 241 tgtgactcgccatgaggatggcagctgggggagtgaagccaacctcatccccagcagagg 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 441 tgtgactcgccatgaggatggcagctgggggagtgaagccgacctcatccccagcagagg 500
Query: 301 atgaagctgaagcagaggatgactcacctgtagtcagccaggtagctgttaacattgctg 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgaagttgaagcagaggatgactcacctgtagtcagccaggtagctgttaacattgctg 560
Query: 361 agactgagacgagcctgagggccctaaagcaaatggagtagcttccaagcctctcggccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agactgagacgagcctgagggccctaaagcaaatggagtagcttccaagcctctcggccc 620
Query: 421 gtcaagctgactcgaccaga 440
||||||||||||||||||||
Sbjct: 621 gtcaagctgactcgaccaga 640
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_j21.g1 MSMg01no373_j21.g1 CHROMAT_FILE:
MSMg01no373_j21.g1 PHD_FILE: MSMg01no373_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:37 2005
(456 letters)
>mm_chr14_122580828_122581685
Length = 858
Score = 810 bits (419), Expect = 0.0
Identities = 448/459 (97%), Gaps = 4/459 (0%)
Strand = Plus / Minus
Query: 1 ttttcaaatatctactccaaaactgatgacgtaagacttaaagtctcttgttaaaccaaa 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ttttcaaatatctactccaaagctgatgacgtaagacttaaagtctcttgttaaaccaaa 599
Query: 61 gaaaacttcaaaatatatgctcttttcacctaaaaaaaattcagtgtttttcatgagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gaaaacttcaaaatatatgctcttttcacctaaaaaaaattcagtgtttttcatgagcag 539
Query: 121 attttggcaaaaagctttttggaaccctcagtcattcttagctgagtaagtgggtccaga 180
|||||||| |||||||||||||||||||||||||||||| | || |||||||||||||||
Sbjct: 538 attttggc-aaaagctttttggaaccctcagtcattcttggttgggtaagtgggtccaga 480
Query: 181 g---aacatttgggaaccactgtgcttcacataggtggggtgagcgtctcagctactcca 237
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gaacaacatttgggaaccactgtgcttcacataggtggggtgagcgtctcagctactcca 420
Query: 238 gagcgcccctaagttagcgcggtacatgccagatgctgacagccctgccaacccagcgac 297
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 419 gagcgcccctaagttagcgcggtacatgccagatgctgacagccctgccaacccagtaac 360
Query: 298 gtttgtacccattgcccgggtccacgcaaagccctcccactggaaggcagcagccgcagc 357
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 359 gtttgtacccattgcccgggtccacgcaaagccctcccactgggaggcagcagccgcagc 300
Query: 358 gaccttggcagaggtcaaggaccggaggcacagaggtatcgggctagagtgcccatgcag 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gaccttggcagaggtcaaggaccggaggcacagaggtatcgggctagagtgcccatgcag 240
Query: 418 gctccagagaccactctggctaccgccttcgccgcgtgg 456
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gctccagagaccactctggctaccgccttcgccgcgtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 858
Length adjustment: 10
Effective length of query: 446
Effective length of database: 848
Effective search space: 378208
Effective search space used: 378208
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
