Query= MSMg01no376_i06.b1 MSMg01no376_i06.b1 CHROMAT_FILE:
MSMg01no376_i06.b1 PHD_FILE: MSMg01no376_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:26 2005
(545 letters)
>mm_chr14_80764827_80765771
Length = 945
Score = 988 bits (511), Expect = 0.0
Identities = 534/543 (98%), Gaps = 4/543 (0%)
Strand = Plus / Minus
Query: 5 gaattctttcaagtttc--ttttttttcctcgtactaagttttgctaaagacattctgta 62
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gaattctttcaag--tcaattttttttcctcgtactaagttttgctaaagacattctgta 688
Query: 63 taagctgtgagcatatgttgagtgtgagctggtctagccaaagaatgagtgaccttctgt 122
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 687 taagctgtgagcatatgttgagtgtgagatggtctagccaaagaatgagtgaccttctgt 628
Query: 123 gatgacaagaaagagatgattagttggtcatagttggaaagaaaaaaggtctcttgatta 182
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 627 gatgacaagaaagagatgattagttggtcatcgttggaaagaaaaaaggtctcttgatta 568
Query: 183 tcctgtgtcttcagcatctacattcacttttctcaattctcagtgaacaacaggcaagac 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 tcctgtgtcttcagcatctacattcacttttctcaattctcagtgaacaacaggcaagac 508
Query: 243 caggatgctgtcttcagatagaatgtgattagtaagcatcctaaatacctgcctcagtcc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 caggatgctgtcttcagatagaatgtgattagtaagcatcctaaatacctgcctcagtcc 448
Query: 303 atctcctctatcatataggacaagggttccttctcaattacaggcagttcagagttctct 362
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 atctcctctatcatacaggacaagggttccttctcaattacaggcagttcagagttctct 388
Query: 363 atttactaggtagacacccaaatgattaaaccctaactggcttttagccagtcttgctcc 422
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 atgtactaggtagacacccaaatgattaaaccctaactggcttttagccagtcttgctcc 328
Query: 423 tctctgctggcgttctactgtttgtcacgctctcaaccataaaggagcataccaacaaaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tctctgctggcgttctactgtttgtcacgctctcaaccataaaggagcataccaacaaaa 268
Query: 483 gaagaactgtcatcaatggccagtagactggttctcaaacgaaatgataaactgaaagca 542
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 267 gaagaactgtcatcaatggccagtagactggttctcaaacgaaatgaaaaactgaaagca 208
Query: 543 aag 545
|||
Sbjct: 207 aag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_i06.g1 MSMg01no376_i06.g1 CHROMAT_FILE:
MSMg01no376_i06.g1 PHD_FILE: MSMg01no376_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:26 2005
(529 letters)
>mm_chr14_80595206_80596134
Length = 929
Score = 671 bits (347), Expect = 0.0
Identities = 359/363 (98%)
Strand = Plus / Plus
Query: 1 agaaatgccactttgtgactctcattaacttcctcttcattggtactcatccctaccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaatgccactttgtgactctcattaacttcctcttcattggtactcatccctaccagg 260
Query: 61 aaaggaattgcaatgaggaaacaggatcttacaaagtgaataagaaggaagaattttaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaggaattgcaatgaggaaacaggatcttacaaagtgaataagaaggaagaattttaag 320
Query: 121 tatcttttgaatcctatttatgaattgcagaagtttccatttgaagtatgtaacgggaat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 tatcttttgaatcctatttatgaattgcagaagtttccatttgaagtatgtaactggaat 380
Query: 181 gcacattatttattttttttttttttgtgagagtgggcacagggccaaatagttgttcaa 240
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcacattatttatttatttattttttgtgagagtgggcacagggccaaatagttgttcaa 440
Query: 241 gctagccataaacttctcatgatcctctgcatcagtctgagattatagatgggtaacagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctagccataaacttctcatgatcctctgcatcagtctgagattatagatgggtaacagc 500
Query: 301 agattctgcctgggatagggatgtgaaagatataaattaaagcaacaacttaggagatag 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agattctgcctgggatacggatgtgaaagatataaattaaagcaacaacttaggagatag 560
Query: 361 tag 363
|||
Sbjct: 561 tag 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space: 476961
Effective search space used: 476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
