NNNNAATCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCTTCAGAGAAGTTCCCTTCAGTTCCTTCTGGATACATAA
AGCAACTATGTAAACATAAAAATGGTGGACACAACTGTCTTTCTTCAATT
TGAAAACAAATTAAAGGATGTAACTTCCCAGGTATTACAGGGGCAGCAGC
AACTACTTGCCTGGATTAGCAAGATTTGGAATTCATCAGTAGAGTATTTT
CGACAGGTGCAGGAAAAAGGAGTGGACACAGACTGAGAATACACATCCAC
AGAAAGACTTGAGGAAGTGTGAAAAAATACGTTTACAGAAGTTCAACTTT
ATAAAAAGAAGCCTGCGACTCTGGTCAAAGCCGAAACTTTTTATTCAAAG
AAAATGTTTTATATTTCAAAGTGCATTCACCAGGCATCAAAAAAGAAGCA
TTTCTCTCAAGCATTATTCTGTTTTCTGATATGTAAATCAGAAAATTTAA
GGGAAAACTATTCATATTCTTATCCACTACATACTTTCATGTCAAGAATC
AAAAATGTTACCAAAACAGCAGCAAACTCTTTTTCACTTGTACTATCCAG
GCTTCTGAGTTATTAAAAGCTATTTCAATATTTTCCAATCCTCCCTAAAG
ATTTCTTTACAAAAACTAATTTTCAGAAAAACCTTCCTTACCTAAACTGG
GAAAGAACTTTATAAAAACTCCAATTTTCAAAAAAAAAACTTTATGCTTA
G

NNTTTTTTCCAATGCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAAGGCAAATGGATGG
ATCTAGAAAGTATCATCCTGCATATTATCTTGAGTGAGGTAACCCAATCA
TAAAAGAACACACATGGTGTGCACCCACTGATAAGTGGATATTAGCCAAA
ATTAAAATAGCCAAGATACAATTTACAGACCACATGAATCTCAAGAAGGA
TGACCAAAGTGTAGATGCATCAGTCCTCCTTAGAATGGGAAACAAATTAA
TAGCATGAGGTAATATAGAGAAAGTATGAAGCAGTGACTGAAGAAAAGGT
TATTGAGAGACTTCCCCACCTAGGGTTCTATCACATAAACAGACACCAAA
CCCAGACCCTATTACAGATGCCAAGAAGTGCTTGTTGACAGAAGCCTGAT
ATAGCTGTCTTCTGACAGGTTCTGCCTGAACCTGACAAATACAGAGGCAG
ATTCTTGTAGCCAACCATTGGAAGGAGCACAGGGTTCCCAGTGGAGGAGT
TAGAGAAAGGATCAAATGAACTGAAGGGCTTTGCAACCCCATAGGAAGAA
CAACTATATCAAGATATCATACCCCTAGAACTCCAAGGGATGAAATCCTC
AGAGAGTACTCATGGAGTGACACATGGCTCCAGCCCCATATGTATCAGAA
GATGGGCTTGGCAGGCATTCATGGAAAGGCCTTGGC

Query= MSMg01no377_b03.b1 MSMg01no377_b03.b1 CHROMAT_FILE:
MSMg01no377_b03.b1 PHD_FILE: MSMg01no377_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:08 2005
         (538 letters)



>mm_chr14_109573871_109574809
          Length = 939

 Score =  919 bits (475), Expect = 0.0
 Identities = 520/535 (97%), Gaps = 1/535 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttcagagaagttcccttcagttccttctggatacataaagcaactatgtaaaca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 gaattcttcagagaagttcccttcagttccttctggatacataaagcaactatgtaaaca 680

                                                                       
Query: 65  taaaaatggtggacacaactgtctttcttcaatttgaaaacaaattaaaggatgtaactt 124
           |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 679 taaaaatggtggacacgactgtcttttttcaatttgaaaacaaattaaaggatgtaagtt 620

                                                                       
Query: 125 cccaggtattacaggggcagcagcaactacttgcctggattagcaagatttggaattcat 184
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 619 cccaggtattacaggggcagcagcaactacttgcctagattagcaagatttggaattcat 560

                                                                       
Query: 185 cagtagagtattttcgacaggtgcaggaaaaaggagtggacacagactgagaatacacat 244
           |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 559 cagtagagtattttcgacagatgcaggaagaaggagtggacacagactgagaatacacat 500

                                                                       
Query: 245 ccacagaaagacttgaggaagtgtgaaaaaatacgtttacagaagttcaactttataaaa 304
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 499 ccacagaaagacttgaggaagtgtgaaaaaatacgcttacagaagttcaactttataaaa 440

                                                                       
Query: 305 agaagcctgcgactctggtcaaagccgaaactttttattcaaagaaaa-tgttttatatt 363
           ||||||||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 439 agaagcctgagacactggtcaaagcagaaactttttattcaaagaaaaatgttttatatt 380

                                                                       
Query: 364 tcaaagtgcattcaccaggcatcaaaaaagaagcatttctctcaagcattattctgtttt 423
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tcaaagtccattcaccaggcatcaaaaaagaagcatttctctcaagcattattctgtttt 320

                                                                       
Query: 424 ctgatatgtaaatcagaaaatttaagggaaaactattcatattcttatccactacatact 483
           |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 319 ctgatatgtaaatcagaaaatttaagggaaaactgttcatattcttatccagtacatact 260

                                                                  
Query: 484 ttcatgtcaagaatcaaaaatgttaccaaaacagcagcaaactctttttcacttg 538
           ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 259 ttcatgtcaagaatcaaaaatgttaacaaaacagcagcaaactctttttcacttg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 939
Length adjustment: 10
Effective length of query: 528
Effective length of database: 929
Effective search space:   490512
Effective search space used:   490512
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)