Query= MSMg01no377_k02.b1 MSMg01no377_k02.b1 CHROMAT_FILE:
MSMg01no377_k02.b1 PHD_FILE: MSMg01no377_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:53 2005
(208 letters)
>mm_chr14_31623862_31624469
Length = 608
Score = 339 bits (175), Expect = 1e-97
Identities = 195/203 (96%), Gaps = 3/203 (1%)
Strand = Plus / Minus
Query: 5 gaattcttaaattttcccgtctgtacttaaatctggtatgctacaataaatgaaaattaa 64
|||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gaattcttaagttctgccgtctgtacttaaatctggtatgctacaataaatgaaaattaa 337
Query: 65 gttattaaacaagacaaaggcccagctttctgttttaggtgaaagtgtgcacttatgcac 124
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 336 gttattaaacaagacaaaggcccagctttctgttctaggtgaaagtgtgcacttacgcac 277
Query: 125 ttcctcagtcatctgcttacgccatcaagtgactccccagggcctcagcatgccagggaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ttcctcagtcatctgcttacgccatcaagtgactccccagggcctcagcatgccagggaa 217
Query: 185 gcgctcaccgctnntaagctctg 207
||||||||||| |||||||||
Sbjct: 216 gcgctcaccgc---taagctctg 197
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 208
Length of database: 608
Length adjustment: 9
Effective length of query: 199
Effective length of database: 599
Effective search space: 119201
Effective search space used: 119201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no377_k02.g1 MSMg01no377_k02.g1 CHROMAT_FILE:
MSMg01no377_k02.g1 PHD_FILE: MSMg01no377_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:53 2005
(158 letters)
>mm_chr14_31443222_31443776
Length = 555
Score = 265 bits (137), Expect = 9e-76
Identities = 146/151 (96%), Gaps = 4/151 (2%)
Strand = Plus / Plus
Query: 1 ctggagagaaatgggcagcagttcttaaggacatcagggcatagggcattcctgtggctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggagagaaatgggcagcagttcttaaggacatcagggcatagggcattcctgtggctc 260
Query: 61 tctcatgggcacagccctggactgtcccagcccagcattaacctcttagcacagttctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcatgggcacagccctggactgtcccagcccagcattaacctcttagcacagttctgg 320
Query: 121 ccaggctttctcctgagcagggggggggggg 151
||||||| ||||||| ||||||||||||
Sbjct: 321 ccaggctgtctcctg----gggggggggggg 347
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 158
Length of database: 555
Length adjustment: 8
Effective length of query: 150
Effective length of database: 547
Effective search space: 82050
Effective search space used: 82050
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
