Query= MSMg01no378_a08.b1 MSMg01no378_a08.b1 CHROMAT_FILE:
MSMg01no378_a08.b1 PHD_FILE: MSMg01no378_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:24 2005
(508 letters)
>mm_chr14_79062968_79063875
Length = 908
Score = 729 bits (377), Expect = 0.0
Identities = 449/487 (92%), Gaps = 22/487 (4%)
Strand = Plus / Plus
Query: 22 tccttttctttattcatgctattcaacgtgtgcatgtactctcacctagcgtcgagcatt 81
||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||
Sbjct: 244 tccttttctttattcatgctattcatcgtgtgcatttactctcacctagcgttgagcatt 303
Query: 82 tcaaaatgtatgtctggggctagagagacggcgcagtggttaagtatactgactgctctt 141
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 304 tcaaaatgtatgtctggggctagagagacggcgcagcggttaagtatactgactgctctt 363
Query: 142 gctgaagacctgggttggttcctagcctctacatagaggctcacaaccacctgtaaccaa 201
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 364 gctgaagacctgcgttggttcctagcctctacataaaggctcacaaccacctgtaaccaa 423
Query: 202 attccaggagatccaatgccttcttctaaccaaagtaagctcctgaccacatatcacaca 261
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 424 attccaggagatccaatgccttcttctaaccaaagtaagctcctgaccaaatatcacaca 483
Query: 262 cacacacacacacacactttctcacacacacacacacacacacacactaatattttaaaa 321
||||||||||||||||| |||||||||||||||||||||
Sbjct: 484 cacacacacacacacac----------------------acacacactaatattttaaaa 521
Query: 322 aattttagtgttaaattttttttgacaaaacgcattcacaggaaacaactgtgtctcttc 381
|||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 522 aattttagtgttaaatattttttgacaaaacacattcataggaaacaactgtgtctcttc 581
Query: 382 acccagtgtttctttccctgtgagaagcagagtcaacggggctcttattctctctccacc 441
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 582 acccagtgtttctttccctgtgagaagcagagtcagtggggctcttagcctctctccacc 641
Query: 442 accagcctgggtccccaccccagaaatgcaggcgggcaactgagcttcataactgaacgt 501
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct: 642 accagcctgggtccccaccccagaaatgcagacgggcaactgagcttcataactgaacat 701
Query: 502 gcccact 508
|||||||
Sbjct: 702 gcccact 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space: 447204
Effective search space used: 447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_a08.g1 MSMg01no378_a08.g1 CHROMAT_FILE:
MSMg01no378_a08.g1 PHD_FILE: MSMg01no378_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:24 2005
(459 letters)
>mm_chr14_79277322_79278180
Length = 859
Score = 864 bits (447), Expect = 0.0
Identities = 456/459 (99%)
Strand = Plus / Minus
Query: 1 agtagcactgggagaattaccgccaatgagatgagatggatttagcttgtgaattttttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 agtagcactgggagaattaccgccaatgagatgagatggatttagcttgtgaattttttt 600
Query: 61 ttactcaataaattctgactttgtagagatgcaaacatgccaacctgtttctaatatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ttactcaataaattctgactttgtagagatgcaaacatgccaacctgtttctaatatggt 540
Query: 121 atgttcacaacaaaggactctcagttaagaccaagagaattgctacttcagggcacttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 atgttcacaacaaaggactctcagttaagaccaagagaattgctacttcagggcacttaa 480
Query: 181 gaaatctgtgggcctcttaggtgagcactatattaaaaggaaaccttaataactgagggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 gaaatctgtgggcctcttaggtgagcactatattaaaaggaaaccttaataactgagggt 420
Query: 241 gacaaggatatagctaagtgaagtcacttaaagtagcagcaacaacatatcctacaaaaa 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gacaaggaaatagctaagtgaagtcacttaaagtagcagcaacaacatatcctacaaaaa 360
Query: 301 agactgtattccacagctgccacattactttaactgtgcactttcaacaatagaagctac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 agactgtattccacagctgccacattactttaactgtgcactttcaacaatagaagctac 300
Query: 361 tggaacaaggaaatgggaacccgtgacttggttgtgcattgaaaattttaaaaagctgtc 420
|||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 299 tggaacaaggaaatgggaacccatgacttggttgtgcattgaaaatttaaaaaagctgtc 240
Query: 421 tgagagggtctggaactgttatcagtagtagacagggac 459
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tgagagggtctggaactgttatcagtagtagacagggac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
