Query= MSMg01no378_d06.b1 MSMg01no378_d06.b1 CHROMAT_FILE:
MSMg01no378_d06.b1 PHD_FILE: MSMg01no378_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:38 2005
(541 letters)
>mm_chr14_101279240_101280185
Length = 946
Score = 949 bits (491), Expect = 0.0
Identities = 525/539 (97%), Gaps = 5/539 (0%)
Strand = Plus / Minus
Query: 5 gaattctagtccatcctgagatatggaataagaccccat-----ggggggaaaatgactt 59
|||||||||||||||||||||||| |||||||||||||| |||||| |||||||||
Sbjct: 743 gaattctagtccatcctgagatatagaataagaccccatggggggggggggaaatgactt 684
Query: 60 agcatctaaactttcagctaaaacttttaacttcataaccaaaactgttttaagttttcc 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 agcatctaaactttcagctaaaacttttaacttcataaccaaaactgttttaagttttcc 624
Query: 120 acacaaatatccatgatttattgtcaaattttagaattttgttccatgttatgaaagtcg 179
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 623 acacaaatatccatgatttattgtcaaattttagaattttgttccatgttgtgaaagtcg 564
Query: 180 ggaatttaagaagattcttgggttcattttttcaatcacaggaaatactcctgtgtttgc 239
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ggaatttaagaggattcttgggttcattttttcaatcacaggaaatactcctgtgtttgc 504
Query: 240 taacaaagatatttgagggtcagagaagacagtctattttcaagtctatgactacaaagc 299
|||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 taacaaaggtattggaggttcagagaagacagtctattttcaagtctatgactacaaagc 444
Query: 300 gcattcctggtcctcttggtgtctttgcaaatgagtgactgcaggcttgatgctgtcatg 359
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 443 gcattcctggtcctcttggtgtctttgcaaatgagtgactacaggcttgatgctgtcatg 384
Query: 360 gttcactaactagcctgaggagaaactcttgactactaataaacagtgtttgacatgtta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gttcactaactagcctgaggagaaactcttgactactaataaacagtgtttgacatgtta 324
Query: 420 agtagcttcggtctccagcattgaatcctgcagtgacacacaatcttgtagcctagcaca 479
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 323 agtagcttcggtctccagcattgaatcctgcagtgacacacagtcttgtagcctagcaca 264
Query: 480 agcttagtcaggcaaagggtgtgaccagacatcatttcatcctactgcttttgctgggt 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agcttagtcaggcaaagggtgtgaccagacatcatttcatcctactgcttttgctgggt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 946
Length adjustment: 10
Effective length of query: 531
Effective length of database: 936
Effective search space: 497016
Effective search space used: 497016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_d06.g1 MSMg01no378_d06.g1 CHROMAT_FILE:
MSMg01no378_d06.g1 PHD_FILE: MSMg01no378_d06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:38 2005
(450 letters)
>mm_chr14_101091267_101092116
Length = 850
Score = 832 bits (430), Expect = 0.0
Identities = 445/450 (98%)
Strand = Plus / Plus
Query: 1 ctctggttcgctatcagcaatgatatctatactggagagatgtcttcatccaggttttat 60
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 ctctggttcactatcagcaatgatatccatactggagagatgtcttcatccaggttttat 260
Query: 61 tgggaattgtcaatcaaggtcagtatctaaaatgagcagagtctaagaaaataaaaatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggaattgtcaatcaaggtcagtatctaaaatgagcagagtctaagaaaataaaaatgt 320
Query: 121 tgttcagtgaaaaccctataagatactacacagagacattgctgctctttagatcagaca 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttcagtgaaaaccctataagacactacacagagacattgctgctctttagatcagaca 380
Query: 181 tggtgatagaactagcatcatagctagaagagagcatgatggaattatagaccttgctta 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 381 tggtgatagaactagcatcatagctaaaagagagcatgatggaattatagaccttgctta 440
Query: 241 accacacgggctaacagtcatggaaaactctatgtcacattaatgcaatactggcctgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 accacacgggctaacagtcatggaaaactctatgtcacattaatgcaatactggcctgat 500
Query: 301 atgggaacataacattgctggtatcatttaaattttcggaagttcttctagagtttgcaa 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 atgggaacataacattgctggtatcatttaaattttgggaagttcttctagagtttgcaa 560
Query: 361 gggtttcttctccaagcaataagtctgagaattcatgaaattttgttttgaatgcagctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gggtttcttctccaagcaataagtctgagaattcatgaaattttgttttgaatgcagctt 620
Query: 421 gtgattgacaaggttatattatcgtttgcc 450
||||||||||||||||||||||||||||||
Sbjct: 621 gtgattgacaaggttatattatcgtttgcc 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 450
Length of database: 850
Length adjustment: 10
Effective length of query: 440
Effective length of database: 840
Effective search space: 369600
Effective search space used: 369600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
