Query= MSMg01no378_m20.b1 MSMg01no378_m20.b1 CHROMAT_FILE:
MSMg01no378_m20.b1 PHD_FILE: MSMg01no378_m20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:22 2005
(504 letters)
>mm_chr14_83680169_83681074
Length = 906
Score = 893 bits (462), Expect = 0.0
Identities = 495/510 (97%), Gaps = 8/510 (1%)
Strand = Plus / Plus
Query: 2 caagttaaaggaggaaagtttttattacttaggacatctaggaagaacaaagataccttt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 caagttaaaggaggaaagtttttattacttaggacatctaggaagaacaaagataccttt 255
Query: 62 catgctcagaattctttgaaagctcaaattttctgaatataagttaagagaagaggaatg 121
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 256 catgctcagaatgctttgaaagctcaaattttctgaatataagttaagagaagacgaatg 315
Query: 122 acatgaaaagatttccagtaaggttaaggtgctgcacaagtcactggttactgtgatata 181
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 316 acatgaaaagatttccagtaaggttaaggtgctgcacaggtcactggttactgtgatata 375
Query: 182 tgcatgttatgaggcttgtggcctcattaggtacacgtggcagacaggagatgctgtaca 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tgcatgttatgaggcttgtggcctcattaggtacacgtggcagacaggagatgctgtaca 435
Query: 242 cactttcacaagaggaaagtaaatctctgatgaaaccacaagagcttagaagttccttga 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 cactttcacaagaggaaagtaaatctctgatgaaaccacaagagcttagaagttccttga 495
Query: 302 aataaaaaaaaa------ccttattgagatagtcaaactttattaccttgacacctgaca 355
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 496 aataaaaaaaaaaaaaaaccttattgagatagtcaaactttattaccttgacagatgaca 555
Query: 356 caaagcctaaattacattaaaattttgaacaagtaatgatgtacaccaatttta--gttt 413
||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 556 caaagcctaaattaccttaaaattttgaacaagtaatgatgtacaccaattttacagttt 615
Query: 414 aaatagaccatacaatcatgctaatacagttttatccacctaaaactgcaggagctagtt 473
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 616 aaatagaccatacaatcatgctaatacagttttagccacctaaaactgcaggagctagtt 675
Query: 474 tgcattctatctttgtctctatgaatctag 503
||||||||||||||||||||||||||||||
Sbjct: 676 tgcattctatctttgtctctatgaatctag 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 906
Length adjustment: 10
Effective length of query: 494
Effective length of database: 896
Effective search space: 442624
Effective search space used: 442624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_m20.g1 MSMg01no378_m20.g1 CHROMAT_FILE:
MSMg01no378_m20.g1 PHD_FILE: MSMg01no378_m20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:22 2005
(181 letters)
>mm_chr14_83843283_83843863
Length = 581
Score = 340 bits (176), Expect = 2e-98
Identities = 179/180 (99%)
Strand = Plus / Minus
Query: 1 aatgcctttgagcacagtgctgcaggacatttcaaaatcactgttaatgcttcagagaat 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aatgcctttaagcacagtgctgcaggacatttcaaaatcactgttaatgcttcagagaat 321
Query: 61 ggatgaggatcaaatgaattgcatagattagatataaatggaacaagaaataagcaaacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggatgaggatcaaatgaattgcatagattagatataaatggaacaagaaataagcaaacg 261
Query: 121 tgaagaatatgctttcaaaaatgttgctattttataaacaacagcaatcatttcctcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgaagaatatgctttcaaaaatgttgctattttataaacaacagcaatcatttcctcatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 581
Length adjustment: 8
Effective length of query: 173
Effective length of database: 573
Effective search space: 99129
Effective search space used: 99129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
