Query= MSMg01no379_f07.b1 MSMg01no379_f07.b1 CHROMAT_FILE:
MSMg01no379_f07.b1 PHD_FILE: MSMg01no379_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:04 2005
(466 letters)
>mm_chr14_113192677_113193545
Length = 869
Score = 787 bits (407), Expect = 0.0
Identities = 432/441 (97%), Gaps = 3/441 (0%)
Strand = Plus / Plus
Query: 29 gtca-aaggaaatgaaaatgcacaaaaagaaattaaaagtttatgatggggacaatacta 87
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 gtcataaggaaatgaaaatgcacaaaaagaaattaaaagtttatgatggggacaatacta 288
Query: 88 aataatgggtataaacttgcttgaaaatctgtgtagtctataaatccatttgaacagaga 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 aataatgggtataaacttgcttgaaaatctgtgtagtctataaatccatttgaacagaga 348
Query: 148 tatggtatagtttagatctatctagatagatgagaaaggatgatattatcaggaatcata 207
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tatggtgtagtttagatctatatagatagatgagaaaggatgatattatcaggaatcata 408
Query: 208 tttggaatatggtagtcataaaatggataatatgataaccttttttt--attggcacaat 265
|||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 409 tttggaatatggtagtcataaaatggataatacgataaccttttttttaattggcacaat 468
Query: 266 tatgtaagatgcaaggtttctatcaacaaaaataaatagcatctcccacagaggaacaca 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tatgtaagatgcaaggtttctatcaacaaaaataaatagcatctcccacagaggaacaca 528
Query: 326 gtaaaaatactttagcccacaatgtaaaaactggtcatcttattcagtcatctgaatact 385
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 529 gtaaaaatactttagcccacaatgtaaaaactggtcatcttattcagtcacctgtatact 588
Query: 386 gatgacattggaaccattcaatatgattgaatacaaatttataaatagtatctggagatg 445
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 589 gatgacattggaaccattcaatatgattgaatacaaagttataaatagtatctggagatg 648
Query: 446 agaggtggggttatgtggatt 466
|||||||||||||||||||||
Sbjct: 649 agaggtggggttatgtggatt 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 869
Length adjustment: 10
Effective length of query: 456
Effective length of database: 859
Effective search space: 391704
Effective search space used: 391704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no379_f07.g1 MSMg01no379_f07.g1 CHROMAT_FILE:
MSMg01no379_f07.g1 PHD_FILE: MSMg01no379_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:04 2005
(388 letters)
>mm_chr14_113391717_113392504
Length = 788
Score = 673 bits (348), Expect = 0.0
Identities = 355/358 (99%), Gaps = 2/358 (0%)
Strand = Plus / Minus
Query: 31 cagttgtgccactactgaaaaagtaggtattcctttccatggtatttcctgttaaaacgt 90
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 cagttgtgccactactgaaaaagtaggtattcctttccatggtatttcctgttaaaacgt 729
Query: 91 atagggttcaaaaccaggttataaacccagatgatcagctttctccccaggtggcacaca 150
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 728 atagggttcaaaaccaggttataaacccagatgatcagctttctccccaggtggcacata 669
Query: 151 tgaacattccactactatggaactagtaggaatgaaaattcacattattaccagcttgtc 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tgaacattccactactatggaactagtaggaatgaaaattcacattattaccagcttgtc 609
Query: 211 gtttctcatgttcagcttgattttttttttttgtggcacctcattcatcagcaatttgaa 270
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gtttctcatgttcagcttga--ttttttttttgtggcacctcattcatcagcaatttgaa 551
Query: 271 atttgctaattcataccttacaatgggttttttcttgtattagtctgttatgtcaaagag 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 atttgctaattcataccttacaatgggttttttcttgtattagtctgttatgtcaaagag 491
Query: 331 aatcattgtaacattcttaagattatttccttttagtcccccacagaaaccagaatgt 388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 aatcattgtaacattcttaagattatttccttttagtcccccacagaaaccagaatgt 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
