Query= MSMg01no380_f07.b1 MSMg01no380_f07.b1 CHROMAT_FILE:
MSMg01no380_f07.b1 PHD_FILE: MSMg01no380_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:22 2005
(492 letters)
>mm_chr14_16890110_16891001
Length = 892
Score = 882 bits (456), Expect = 0.0
Identities = 479/487 (98%)
Strand = Plus / Minus
Query: 6 gaattccactcacctgcgatcatcagatcctgggcatgctagggcccctggggcatggag 65
|||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 gaattccactcaccagtgatcatcagatcctgggcatgctagggcccctggggcatggag 770
Query: 66 agtcctctggggactatgggactgtccatcaagtttaactccaaggtggcctggagctgg 125
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 agttctctggggactatgggactgtccatcaagtttaactccaaggtggcctggagctgg 710
Query: 126 tgccagaagcaacccagcatcttgattactaactcagagtcctcctcatttatcaagtat 185
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tgccagaagcaacccaacatcttgattactaactcagagtcctcctcatttatcaagtat 650
Query: 186 ggcactaacagcatctaaagtcttttgtttctctggctatgaatttcatgtggcaattga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ggcactaacagcatctaaagtcttttgtttctctggctatgaatttcatgtggcaattga 590
Query: 246 agttttttgcctgaacactcctgtctgctatatgtagatgtgttgaatgatgattgtggc 305
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 agttttctgcctgaacactcctgtctgctatatgtagatgtgttgaatgatgattgtggc 530
Query: 306 aatgcccatccatgtaggcaaatgtaggagaaaacattttgaataatttgaacaaatgcc 365
| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 529 agtgcccatccatgtaggcaaatgtaggagaaaacagtttgaataatttgaacaaatgcc 470
Query: 366 ctctgcctttctaaaatacttagtttttagaatgaacctcagattcctcattctgttctt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ctctgcctttctaaaatacttagtttttagaatgaacctcagattcctcattctgttctt 410
Query: 426 ggncttagcattagtagtcatgaatcctctgccacagcattatgctgtgctcatgctgag 485
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ggtcttagcattagtagtcatgaatcctctgccacagcattatgctgtgctcatgctgag 350
Query: 486 tttcagc 492
|||||||
Sbjct: 349 tttcagc 343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space: 425124
Effective search space used: 425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no380_f07.g1 MSMg01no380_f07.g1 CHROMAT_FILE:
MSMg01no380_f07.g1 PHD_FILE: MSMg01no380_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:22 2005
(464 letters)
>mm_chr14_16730190_16731053
Length = 864
Score = 861 bits (445), Expect = 0.0
Identities = 460/465 (98%), Gaps = 1/465 (0%)
Strand = Plus / Plus
Query: 1 tttatgagaagaatctcaatgag-aaaaaaggggtagttcagacattgactttcctaagt 59
||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 200 tttatgagaaggatctcaatgagaaaaaaaggggtagttcagacattgaccttcctaagt 259
Query: 60 tttatggcttcatttaggaaaagagatatcaggcttttttgtgagggcagatctggggga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tttatggcttcatttaggaaaagagatatcaggcttttttgtgagggcagatctggggga 319
Query: 120 taactcagggatcatatgtatgctaaatgaatattctacctctgaagtacattctaagat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 taactcagggatcatatgtatgctaaatgaatattctacctctgaagtacattctaagat 379
Query: 180 caaaatccatttttttttaatttgagggagaaagtacatggggagatgaccagagaagct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caaaatccatttttttttaatttgagggagaaagtacatggggagatgaccagagaagct 439
Query: 240 ccttgctcgcttgcttgcttgcttgcttgcttgcttgcttgcttgcctacttgcttactt 299
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ccttgctctcttgcttgcttgcttgcttgcttgcttgcttgcttgcctacttgcttactt 499
Query: 300 gccttcctagctgcctgcctgcctgcctgtttccttgactgcctacctgattgcttgttt 359
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 500 gccttcctagctgcctgcctgcctgcctgtttccttgactacctacctgattgcttgttt 559
Query: 360 ttagttaaccttcatgctttccttcagctcaaaaagaaccaagcatgtcaagaaatcaca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttagttaaccttcatgctttccttcagctcaaaaagaaccaagcatgtcaagaaatcaca 619
Query: 420 tgtaaggccatcttattcttggccttaatactgcagtttccttgt 464
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgtaaggccatcttattcttggccttaatactgcagtttccttgt 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
