Query= MSMg01no380_g18.b1 MSMg01no380_g18.b1 CHROMAT_FILE:
MSMg01no380_g18.b1 PHD_FILE: MSMg01no380_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:29 2005
(519 letters)
>mm_chr14_23227906_23228824
Length = 919
Score = 886 bits (458), Expect = 0.0
Identities = 506/526 (96%), Gaps = 8/526 (1%)
Strand = Plus / Minus
Query: 1 ccaacaacaagcaatgtcaacaagaagaatcaatgaatgcaaa-------gcctcacata 53
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct: 744 ccaacaacaagcaatgtcaacaagaagaatcaatgtatgcaaagcctcacgcctcacata 685
Query: 54 agccgggcatggtggcgcacacctgtgatctcagcacttgggaggcagaggcaggcggat 113
|||||||| |||||| ||| |||||||||||||||||||||||||||| ||||||||||
Sbjct: 684 agccgggcgtggtggtgcatgcctgtgatctcagcacttgggaggcagatgcaggcggat 625
Query: 114 ttttgagttcaaggccagtctggtctacagagtgagttccaggacagccagggctacaca 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttttgagttcaaggccagtctggtctacagagtgagttccaggacagccagggctacaca 565
Query: 174 gagaaatcctgtctagaaaaaataaataaataaacaaataaatagttttttaaaaaatga 233
|||||| ||||||| ||||||| ||| ||| |||||||||||| ||||||||||||||||
Sbjct: 564 gagaaaccctgtctcgaaaaaa-aaaaaaaaaaacaaataaatggttttttaaaaaatga 506
Query: 234 aagcctcacataattactgctcactaaaattctctcattgaggacaattctttggagcac 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagcctcacataattactgctcactaaaattctctcattgaggacaattctttggagcac 446
Query: 294 agactagccatacgtgtaagcatgctgagtgtaattttccctacttcataaagagagaaa 353
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 445 agactagccatacgtgtaagcatgctgagtgtaatttcccctacttcataaagagagaaa 386
Query: 354 gaaaattgggtctcagagaggttaaatgactaacctgagtttacacagctactaagtgtt 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaaaattgggtctcagagaggttaaatgactaacctgagtttacacagctactaagtgtt 326
Query: 414 aatggagtgttggtacagtggcctgggccactgacctcagagccaagcatcgttctcatt 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aatggagtgttggtacagtggcctgggccactgacctcagagccaagcatcgttctcatt 266
Query: 474 ctgtcccatttatttcctggttgaatatggccacgaactccatctt 519
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgtcccatttatttcctggttgaatatggccacgaactccatctt 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no380_g18.g1 MSMg01no380_g18.g1 CHROMAT_FILE:
MSMg01no380_g18.g1 PHD_FILE: MSMg01no380_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:30 2005
(476 letters)
>mm_chr14_23061124_23061999
Length = 876
Score = 920 bits (476), Expect = 0.0
Identities = 476/476 (100%)
Strand = Plus / Plus
Query: 1 aatatggatatggaggaattcccattttttaatctctaatagggtgtggggaatctctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatatggatatggaggaattcccattttttaatctctaatagggtgtggggaatctctca 260
Query: 61 ggtagattttgtacacagaaacactttattcatttacctccactgcctgcccacccccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtagattttgtacacagaaacactttattcatttacctccactgcctgcccacccccaa 320
Query: 121 ataacaacagaagctatgcatgccagggacagcaaggtgggatttttctgtaatgctggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ataacaacagaagctatgcatgccagggacagcaaggtgggatttttctgtaatgctggc 380
Query: 181 tgtatatagagggtggtgacacagtatttaagatgatattccaaccttgtctatagctcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtatatagagggtggtgacacagtatttaagatgatattccaaccttgtctatagctcc 440
Query: 241 taattatggcgaggaatcagtgtgccaatcgatagtgatttatggtggggatgcacaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taattatggcgaggaatcagtgtgccaatcgatagtgatttatggtggggatgcacaagt 500
Query: 301 gcacatggctaacactgatctgcatgtaaattccttgacataataagaagttattaccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcacatggctaacactgatctgcatgtaaattccttgacataataagaagttattaccaa 560
Query: 361 tgacagtcactgtctgaccgctaattcatcaatacatccttccactggtgtgagcctcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgacagtcactgtctgaccgctaattcatcaatacatccttccactggtgtgagcctcat 620
Query: 421 tggctgtgtagggggtggaggaacagtatgtcataccattgccttctcctgtaagt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggctgtgtagggggtggaggaacagtatgtcataccattgccttctcctgtaagt 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
