Query= MSMg01no380_p21.b1 MSMg01no380_p21.b1 CHROMAT_FILE:
MSMg01no380_p21.b1 PHD_FILE: MSMg01no380_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:15 2005
(522 letters)
>mm_chr14_96029749_96030672
Length = 924
Score = 845 bits (437), Expect = 0.0
Identities = 501/523 (95%), Gaps = 4/523 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttttt--ttcttcattttttcttgaatattttctttatttacatttcaaatgt 61
|||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 202 ggaattcttttttattcttcattttttattgaatattttctttatttacatttcaaatgt 261
Query: 62 tatcccctttcaagtgccccctggtaaatcccttatttcaccccctcccctcttccctct 121
||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 262 tatcccctttcaagtcccccctggtaaatcccttatttcaccccctcccctattccctct 321
Query: 122 gcttctatgagggttttcccccacccacctacccactactgtctcccctccctggcattc 181
|||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 322 gcttctatgagggtgttcccccacccacctacccactcctgtctcccctcactggcattc 381
Query: 182 ccctatcctgggccatcgaacttaaatgttcctcctactctgtttcgttttctctccttc 241
|||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 382 ccctatactgggccatcgaacttaaatgatcctcccactctgtttcgttttctctccttc 441
Query: 242 tcctgacacttcgatccttaaacattcccagccctaatattcttccttcaactttcatag 301
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 442 tcttgacacctcgatccttaaacattcccagccctaatattcttccttcaacttttatag 501
Query: 302 atctatatatatcacatctcaatcacccatggaggagaatgaaggaagtggcataaatgg 361
||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 502 atctatatatatcacctctcaatcacccatggaggagaaggaaggaagtggcataaatgg 561
Query: 362 tattaatgttggaggtacaaaggtagataagctggaggagtaaaagatactgaatgtcag 421
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 562 tattaatgttggaggtacaaaggtagataagctggaggagcaaaatatactgaatgtcag 621
Query: 422 tttcctagcaaggtatagctatggcacccttacactcacatcacctgtgattccttcta- 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tttcctagcaaggtatagctatggcacccttacactcacatcacctgtgattccttctac 681
Query: 481 aaaa-atctgcccaagatccggcctgtctacactatatcaaag 522
|||| ||||| |||||||| |||||||||||||||||||||||
Sbjct: 682 aaaatatctgtccaagatctggcctgtctacactatatcaaag 724
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 924
Length adjustment: 10
Effective length of query: 512
Effective length of database: 914
Effective search space: 467968
Effective search space used: 467968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no380_p21.g1 MSMg01no380_p21.g1 CHROMAT_FILE:
MSMg01no380_p21.g1 PHD_FILE: MSMg01no380_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:15 2005
(585 letters)
>mm_chr14_96171978_96172962
Length = 985
Score = 1118 bits (578), Expect = 0.0
Identities = 583/585 (99%)
Strand = Plus / Minus
Query: 1 ataggtctctccctgtatganaacctactccaaagatttaaagatcttggttttagacat 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ataggtctctccctgtatgaaaacctactccaaagatttaaagatcttggttttagacat 571
Query: 61 gaagctctgcaattactagtggataatgcagtaaaatacttcaagataagtgaatgacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gaagctctgcaattactagtggataatgcagtaaaatacttcaagataagtgaatgacag 511
Query: 121 aagactttccaagtaggtatatggttgcttaagaaataagtcccacaattgacaaaggac 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 510 aagactttccaagtaggtatgtggttgcttaagaaataagtcccacaattgacaaaggac 451
Query: 181 aatagctaaaagtatataaataaccaatatacaattttaatatacaaaaaatcaaaattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 aatagctaaaagtatataaataaccaatatacaattttaatatacaaaaaatcaaaattc 391
Query: 241 aaaagcaaccaatccaatcaatacatttgataatgtagtgtacaattataaaaatatgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aaaagcaaccaatccaatcaatacatttgataatgtagtgtacaattataaaaatatgaa 331
Query: 301 atgctaacgccattaaacatgaaaaatttcaactaaattagccatcaaataatataattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 atgctaacgccattaaacatgaaaaatttcaactaaattagccatcaaataatataattt 271
Query: 361 gaaagtatgtgaagatgactttcccagtaagaacaaaattttcaaagaaaaagacgaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gaaagtatgtgaagatgactttcccagtaagaacaaaattttcaaagaaaaagacgaaga 211
Query: 421 gatgttgataagatagttccacagttaagagcaactttgttcttccagaggacattggtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 gatgttgataagatagttccacagttaagagcaactttgttcttccagaggacattggtt 151
Query: 481 cagtccctactacccacatgttagctaacaaacactgttggtcaattgttagtatttatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 150 cagtccctactacccacatgttagctaacaaacactgttggtcaattgttagtatttatg 91
Query: 541 agagaacattctactgacatctataaagggtagacaaatttatat 585
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 90 agagaacattctactgacatctataaagggtagacaaatttatat 46
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
