Query= MSMg01no381_l21.b1 MSMg01no381_l21.b1 CHROMAT_FILE:
MSMg01no381_l21.b1 PHD_FILE: MSMg01no381_l21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:15 2005
(458 letters)
>mm_chr14_81319626_81320483
Length = 858
Score = 818 bits (423), Expect = 0.0
Identities = 447/455 (98%), Gaps = 2/455 (0%)
Strand = Plus / Minus
Query: 5 gaattcaaaaggattcc-aaattttaactagacaaaaggttgaaatcacagtgagttttt 63
||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gaatttaaaagga-gccaaaattttaactagacaaaaggttgaaatcacagtgagttttt 432
Query: 64 atagtatgaatttagaccattaatgcatcagtttctgcatcagttgtccaaaatccatat 123
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 431 atagtatgaatttagaccattaatgcatcagtttctgcattagttgtccaaaatccatat 372
Query: 124 tataaacctagtcgtctgaggtgttgcatcaaataaaaccagagacaaggcaaaatatac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tataaacctagtcgtctgaggtgttgcatcaaataaaaccagagacaaggcaaaatatac 312
Query: 184 ttttgcctaaggagcatgcatggaaatcaggtcatagtgatgctgacagaagaaaatact 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttttgcctaaggagcatgcatggaaatcaggtcatagtgatgctgacagaagaaaatact 252
Query: 244 ggacaaacaattattataaaatataacacaaaactactctcagaaaatgtgttagttact 303
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 251 ggacaaacaattattataaaatataacacaaaactactctcagaaaatgggttagttact 192
Query: 304 tttctattgctgggataaaatgtcatgaccatggcaacttttagaaggaaaggtgtgttt 363
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tttttattgctgggataaaatgtcatgaccatggcaacttttagaaggaaaggtgtgttt 132
Query: 364 aggagcccatcagcaatctttcaggaaagtgcagtggcaggtaccatgcatggtggcagg 423
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 131 aggagcccatcagcaatctttcaggaaagtgcattggcaggtaccatgcatggtggcagg 72
Query: 424 aacagctgggtgctcacacttgcaatggcatgcag 458
|||||||||||||||||||||||||||||||||||
Sbjct: 71 aacagctgggtgctcacacttgcaatggcatgcag 37
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_l21.g1 MSMg01no381_l21.g1 CHROMAT_FILE:
MSMg01no381_l21.g1 PHD_FILE: MSMg01no381_l21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:15 2005
(449 letters)
>mm_chr14_81210872_81211720
Length = 849
Score = 350 bits (181), Expect = e-100
Identities = 194/203 (95%), Gaps = 8/203 (3%)
Strand = Plus / Plus
Query: 243 gataacagacatacttgtatgcatactataccaggaaatctcctcatctctctctatctc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gataacagacatacttgtatgcatactataccaggaaatctcctcatctctctctatctc 502
Query: 303 ctttttaaaatcctgacattcacataacctttcagggatcaatcagggatagctctatgt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ctttttaaaatcctgacattcacataacctttcagggatcaatcagggatagctctatgt 562
Query: 363 aaaggtggatagctttagctttatgttgtcaaattcaactttgtgaaatttttttttctt 422
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aaaggt--------ttacctttatgttgtcaaattcaactttgtgaaatttttttttctt 614
Query: 423 gaaaactattatttatcttatga 445
|||||||||||||||||||||||
Sbjct: 615 gaaaactattatttatcttatga 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
