Query= MSMg01no382_i20.b1 MSMg01no382_i20.b1 CHROMAT_FILE:
MSMg01no382_i20.b1 PHD_FILE: MSMg01no382_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:20 2005
(565 letters)
>mm_chr14_23426741_23427705
Length = 965
Score = 777 bits (402), Expect = 0.0
Identities = 414/418 (99%)
Strand = Plus / Minus
Query: 2 ctcttgagtttgaggcattttgttacagcatctgagctgactgatacatgcccccaaatc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ctcttgagtttgaggcattttgttacagcatctgagctgactgatacatgcccccaaatc 560
Query: 62 tattgtaatccaaaagtatcttctcactgtcatgtcacagactgttttaagatggtgtgg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tattgtaatccaaaagtatcttctcactgtcatgtcacagactgttttaagatggtgtgg 500
Query: 122 ctaagaacattagctgtcagtctctaatgtaccaaaaacagtcccagcgctatacacaga 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ctaagaacattagctgtcagtctctaatgtaccaaaaacagtcccagcgctatacacaga 440
Query: 182 ttctatagctctgccctcacaacagactttggaggacacactttaactcctgacttcaca 241
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 439 ttctatagctctgccctcacaacagactgtggaggacacactttaactcctgacttcaca 380
Query: 242 atagaaagacagatagcaggaggtacagcctcagcctgtatcccagccttgagcataatc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 atagaaagacagatagcaggaggtacagcctcagcctgtatcccagccttgagcataatc 320
Query: 302 ctgaaatatggagcatccccaatttctacagggaacagcaagtccaacagggatccacaa 361
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 319 ctgaaatatggagcatccccaatttctacagggaacagcaagtccaacaggggtccacaa 260
Query: 362 gtgaagaatggtaggtatattgcggagtacaatagatatggtgcagttaaattgtaaa 419
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 259 gtgaagaatggtaggtatattgcagagtacaatagatgtggtgcagttaaattgtaaa 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_i20.g1 MSMg01no382_i20.g1 CHROMAT_FILE:
MSMg01no382_i20.g1 PHD_FILE: MSMg01no382_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:20 2005
(464 letters)
>mm_chr14_23270636_23271500
Length = 865
Score = 845 bits (437), Expect = 0.0
Identities = 458/465 (98%), Gaps = 1/465 (0%)
Strand = Plus / Plus
Query: 1 catcatttaatatgttgtctgtgaatctcattagcctttttagtctaagggttaggaagg 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 catcatttaatatgttgtctgtgaatctcattagcctttttagcctaagggttaggaagg 260
Query: 61 aaaacagagtgttg-ttgtgtgttgaagactaagtactaaatccacttttcatcaggggg 119
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaacagagtgttggttgtgtgttgaagactaagtactaaatccacttttcatcaggggg 320
Query: 120 cttgttgaccttatgttaagttgcttctttgtgagtctttctgtgctaaggctctggttt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgttgaccttatgttaagttgcttctttgtgagtctttctgtgctaaggctctggttt 380
Query: 180 ccatggcatttacacaaacctagcaaccgttctctatgcagaagctgtggcaaggcctcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccatggcatttacacaaacctagcaaccgttctctatgcagaagctgtggcaaggcctcc 440
Query: 240 gatctcctctgtctaggagtgggaatcactccttaaacagggaatatcttttcccacgtg 299
|||||| |||| | |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 441 gatctcttctgccaaggagtgggaatcactccttaaacagggaatatcttttcccaggtg 500
Query: 300 agttgtagtggatgtgagaatggggctggtggccatgtcagccacatcttggtggtcgca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agttgtagtggatgtgagaatggggctggtggccatgtcagccacatcttggtggtcgca 560
Query: 360 tccagccagtgtctcccttatccgtatgtgacagagacaacttcggtgttcttagttctt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccagccagtgtctcccttatccgtatgtgacagagacaacttcggtgttcttagttctt 620
Query: 420 gaaactgagccacatgcagtgaggagtattgctcccccactcagg 464
|||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 621 gaaactgagccacatgcagtgaggagtattgctcacccactcagg 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 865
Length adjustment: 10
Effective length of query: 454
Effective length of database: 855
Effective search space: 388170
Effective search space used: 388170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
