Query= MSMg01no384_d08.b1 MSMg01no384_d08.b1 CHROMAT_FILE:
MSMg01no384_d08.b1 PHD_FILE: MSMg01no384_d08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:27 2005
(496 letters)
>mm_chr14_24063863_24064758
Length = 896
Score = 951 bits (492), Expect = 0.0
Identities = 492/492 (100%)
Strand = Plus / Plus
Query: 5 gaattctccaagctctgagattgctctcaaaaaactccaggttgcctccagttctggctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccaagctctgagattgctctcaaaaaactccaggttgcctccagttctggctg 264
Query: 65 tttaatttgggatcttttaacagcagttatatcatcagctgatgtccttgcataattaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttaatttgggatcttttaacagcagttatatcatcagctgatgtccttgcataattaaa 324
Query: 125 aaggcatccttgggttcatgcacataaacaaagggcacaggaacaagaatgggaactcac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaggcatccttgggttcatgcacataaacaaagggcacaggaacaagaatgggaactcac 384
Query: 185 attcccaggtgctgagaccctgagcctgtgaaacaatctatatactcctggatactgtga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 attcccaggtgctgagaccctgagcctgtgaaacaatctatatactcctggatactgtga 444
Query: 245 tttgtacacagagttgtaataaataaaataataataagcaactctgaagtttgatgatga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttgtacacagagttgtaataaataaaataataataagcaactctgaagtttgatgatga 504
Query: 305 atatgtaactatgtaattttacagcccctttacttatgatctatcatttcaggatttcaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atatgtaactatgtaattttacagcccctttacttatgatctatcatttcaggatttcaa 564
Query: 365 caccatacaaggaagacaacactctcttcagtacatcctgaagatatctaggctttgaag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caccatacaaggaagacaacactctcttcagtacatcctgaagatatctaggctttgaag 624
Query: 425 ttaagttttgtggggatttataaaaacaattttaaaatttatatctatatatatgtatat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttaagttttgtggggatttataaaaacaattttaaaatttatatctatatatatgtatat 684
Query: 485 ctaagtttttgt 496
||||||||||||
Sbjct: 685 ctaagtttttgt 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_d08.g1 MSMg01no384_d08.g1 CHROMAT_FILE:
MSMg01no384_d08.g1 PHD_FILE: MSMg01no384_d08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:27 2005
(524 letters)
>mm_chr14_24217162_24218089
Length = 928
Score = 986 bits (510), Expect = 0.0
Identities = 522/528 (98%), Gaps = 4/528 (0%)
Strand = Plus / Minus
Query: 1 caacctcctaggatgggaagtgtcttgctgatgccgcacatgagatctaggccttggatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 caacctcctaggatgggaagtgtcttgctgatgccgcacatgagatctaggccttggatc 669
Query: 61 aagaagccagggctcctgaccaggagaccctttcctttactctgccaagcttgatctagc 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 668 aagaagccagggctcctgaccacgagaccctttcctttactctgccaagcttgatctagc 609
Query: 121 cactaggatcaatttactagtaaacctcaccaggggctcaagtctgtgggagagtcatcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 cactaggatcaatttactagtaaacctcaccaggggctcaagtctgtgggagagtcatcg 549
Query: 181 atgtgtgaggtgtgtgtaacgacattagagggacttcaaagtctagttggggacacatta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 atgtgtgaggtgtgtgtaacgacattagagggacttcaaagtctagttggggacacatta 489
Query: 241 gagcaggaaataagttaataacag----aactaaggagatgacagggagtaatatgagaa 296
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 488 gagcaggaaataagttaataacagaactaactaaggagatgacagggagtaatatgagaa 429
Query: 297 gagccaagaaagtcttaaagaagacagtctacctcatttaggaacgtttttctggaaagg 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gagccaagaaagtcttaaagaagacagtctacctcatttaggaacgtttttctggaaagg 369
Query: 357 gagagggtagcctgtttcttgaaggctcagtagactaatacattgggaaggaggtatcac 416
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 gagagggtagcttgtttcttgaaggctcagtagactaatacattgggaaggaggtatcac 309
Query: 417 ctcccccatcccattacttaactaccctgccaatgtatgtctatcatctcatggcccccc 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ctcccccatcccattacttaactaccctgccaatgtatgtctatcatctcatggcccccc 249
Query: 477 caccagaaatccaggaaaaagagccccttacagtcagacagcacacgt 524
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 caccagaaatccaggaaaaagagccccttacagtcagacagcacacgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 928
Length adjustment: 10
Effective length of query: 514
Effective length of database: 918
Effective search space: 471852
Effective search space used: 471852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
