Query= MSMg01no384_f15.b1 MSMg01no384_f15.b1 CHROMAT_FILE:
MSMg01no384_f15.b1 PHD_FILE: MSMg01no384_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:38 2005
(488 letters)
>mm_chr14_10817943_10818830
Length = 888
Score = 928 bits (480), Expect = 0.0
Identities = 483/484 (99%)
Strand = Plus / Minus
Query: 5 gaattacataaaaattcagtaaaatatcaaaatgtaagtaccttcataaacttaatttct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gaattacataaaaattcagtaaaatatcaaaatgtaagtaccttcataaacttaatttct 629
Query: 65 gatgttacctggagtaaaataagagccaggtgcatagccagcctgacagtgaactctgca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gatgttacctggagtaaaataagagccaggtgcatagccagcctgacagtgaactctgca 569
Query: 125 tctaccaatgtatggatgctcacactcttcattttacaaatgaattgaagtctagagagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tctaccaatgtatggatgctcacactcttcattttacaaatgaattgaagtctagagagt 509
Query: 185 cagggtgataataaatatagacactggtgttatcaatcaatatcatataaaagtaacatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 cagggtgataataaatatagacactggtgttatcaatcaatatcatataaaagtaacatt 449
Query: 245 cactaaacagtcaagcctgagaatggacaaataaagcttgtttgatgaaagaacgtttta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cactaaacagtcaagcctgagaatggacaaataaagcttgtttgatgaaagaacgtttta 389
Query: 305 tgctgctggtagctgcataggattagatgacattttgagccacaggaatgcatatcaaca 364
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 388 tgctgctggtagctgcataggattagatgacattttgagccacagggatgcatatcaaca 329
Query: 365 acatagcacggtaaaccacactctttattttctgataatttttaaagaggtagataacag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 acatagcacggtaaaccacactctttattttctgataatttttaaagaggtagataacag 269
Query: 425 ttaccttagcagtccctattccacataaatgtagaccaagcatgaccatagaagctcata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ttaccttagcagtccctattccacataaatgtagaccaagcatgaccatagaagctcata 209
Query: 485 aatg 488
||||
Sbjct: 208 aatg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 888
Length adjustment: 10
Effective length of query: 478
Effective length of database: 878
Effective search space: 419684
Effective search space used: 419684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_f15.g1 MSMg01no384_f15.g1 CHROMAT_FILE:
MSMg01no384_f15.g1 PHD_FILE: MSMg01no384_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:38 2005
(553 letters)
>mm_chr14_10766686_10767638
Length = 953
Score = 1038 bits (537), Expect = 0.0
Identities = 550/555 (99%), Gaps = 2/555 (0%)
Strand = Plus / Plus
Query: 1 caggcagcatggttgcccactgttggttgtgtgcattactgtatgagtccagagtcttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggcagcatggttgcccactgttggttgtgtgcattactgtatgagtccagagtcttct 260
Query: 61 atgactaaagttatgacataaatggtgaaggaagcagaaggacccacacacacatgttaa 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 atgactaaagttatgacataaatggtgaaggaagcagaaggaaccacacacacatgttaa 320
Query: 121 ttagcagggtacactttcctcagggcattctctaacctaagaagtacaaaccactcagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttagcagggtacactttcctcagggcattctctaacctaagaagtacaaaccactcagtc 380
Query: 181 agtactgtaattattattattattaatttactgtaaaaagtactgaaccatggtctcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtactgtaattattattattattaatttactgtaaaaagtactgaaccatggtctcatg 440
Query: 241 catgctaggcaaacactaatcctagtctcatatcttatttagaatctgatatatatgtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catgctaggcaaacactaatcctagtctcatatcttatttagaatctgatatatatgtgt 500
Query: 301 gtgtctctctatatatataaagaaagagatagatcgatacggttataggtataggtataa 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 gtgtctctctatatatataaagaaagagatagatcgatatggttataggtataggtataa 560
Query: 361 atatagatatgtagataaatagctatagatagagatgt--atatatattaattcttagag 418
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 atatagatatgtagataaatagctatagatagagatgtgtatatatattaattcttagag 620
Query: 419 aattgcatacaacattctttgaccataatctccccccaagtcctcccagatcacctccac 478
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aattgcatacaacagtctttgaccataatctccccccaagtcctcccagatcacctccac 680
Query: 479 cttgtgtctttttagaagacagtgcctcacagcatctgttctagtcccctggctcttata 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttgtgtctttttagaagacagtgcctcacagcatctgttctagtcccctggctcttata 740
Query: 539 cttttcctaattgca 553
|||||||||||||||
Sbjct: 741 cttttcctaattgca 755
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
