Query= MSMg01no394_g10.b1 MSMg01no394_g10.b1 CHROMAT_FILE:
MSMg01no394_g10.b1 PHD_FILE: MSMg01no394_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:46 2005
(515 letters)
>mm_chr14_104674772_104675686
Length = 915
Score = 895 bits (463), Expect = 0.0
Identities = 501/519 (96%), Gaps = 10/519 (1%)
Strand = Plus / Plus
Query: 1 tcctttgctcaaagtatatagggatttactatgaaattttgataggcacacacaagcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctttgctcaaagtatatagggatttactatgaaattttgataggcacacacaagcaat 260
Query: 61 gctaatagcctgtgctcttttgggactccctgagacacccaaaattcaaaggacatggga 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 gctaatagcctgtgctcttttgggactccctgagacagccaaaattcaaaggacatggga 320
Query: 121 aatccaatggcttatggatgaaacattattttgtctccctctatggaacttccactcaaa 180
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct: 321 aatccaatggcttatggatgaaacattattttttctctctctatggaacttccactcaaa 380
Query: 181 cattttattattactatattttattattcctgtgcttttagtaatctattataaagagta 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 cattttattaatactatattttattattcctgtgcttttagtaatctattataaagaata 440
Query: 241 tgtttccttccttgtggtcttttctctttttagtgaaattgtctttcttattctttatta 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 tgtttccttccttgtggtcttttctctttttagtgaaattgtctttcttattttttatta 500
Query: 301 atcatttcat----aattttgttttgttttgtttttcgagacagggtttctctttatagc 356
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcatttcattcataattttgttttgttttgtttttcgagacagggtttctctttatagc 560
Query: 357 cctggctgttgtggaactcactctgtagaccaggctggcctcaaactcagaaatccacct 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctggctgttgtggaactcactctgtagaccaggctggcctcaaactcagaaatccacct 620
Query: 417 gcctctgcctcccaagtgtaccacacccggccatttcataatttttgtaccacattttta 476
||||| ||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 gcctc------ccaagtgcaccacacccggccatttcataatttttgtacaacattttta 674
Query: 477 tcatgttaactcctacctcaacttacctcagacccctcc 515
|||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tcatgttaactcctacctcaacttacctcagacccctcc 713
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_g10.g1 MSMg01no394_g10.g1 CHROMAT_FILE:
MSMg01no394_g10.g1 PHD_FILE: MSMg01no394_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:46 2005
(457 letters)
>mm_chr14_104816895_104817751
Length = 857
Score = 868 bits (449), Expect = 0.0
Identities = 455/457 (99%)
Strand = Plus / Minus
Query: 1 tcttcttgtttatatgtaaacattcattctaatagcaagcatttgaaatctatgttatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tcttcttgtttatatgtaaacattcattctaatagcaagcatttgaaatctatgttatca 558
Query: 61 tttacctaattgtttaattccagtttgtatacatagtaattttagaattattagcctatg 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 557 tttacctaattgtttaattccagtttgcatacatagtaattttagaattattagcctatg 498
Query: 121 tccttgtgtgaaacaacaccatcagctagcaatatgtatttaccatttttctatgacttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tccttgtgtgaaacaacaccatcagctagcaatatgtatttaccatttttctatgacttt 438
Query: 181 ttagattattactttattatgaaggagtggtgtcctattacttgaacatataagtgtgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttagattattactttattatgaaggagtggtgtcctattacttgaacatataagtgtgtt 378
Query: 241 acatacttatctattgaaatacatcttaggacagggagtacaacttagtggtagagccct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 acatacttatctattgaaatacatcttaggacagggagtacaacttagtggtagagccct 318
Query: 301 ttcctaacaatatgaggtcttgcttgatcaccagcactgcaaaacaaacaattaccagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttcctaacaatatgaggtcttgcttgatcaccagcactgcaaaacaaacaattaccagca 258
Query: 361 acaaaaatatttgaaataaaaccaaatcacataccttggttgctctaattttaagccagc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 257 acaaaaatatttgaaataaaaccaaatcacataccttggttgctctaattttaagccatc 198
Query: 421 atgagtaagtagaaatagatttttaagtatgcagttt 457
|||||||||||||||||||||||||||||||||||||
Sbjct: 197 atgagtaagtagaaatagatttttaagtatgcagttt 161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
